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The map label for this gene is 157963887

Identifier: 157963887

GI number: 157963887

Start: 4956313

End: 4957143

Strand: Reverse

Name: 157963887

Synonym: Spea_4076

Alternate gene names: NA

Gene position: 4957143-4956313 (Counterclockwise)

Preceding gene: 157963888

Following gene: 157963886

Centisome position: 95.8

GC content: 47.17

Gene sequence:

>831_bases
TTGATTTCTCCGGAGGGAGCCGGAGAAATCATTACTGAAGAGCATCTCATTATGATGAGTTTTGAAGCCTTTACCTCGTT
TGAACAGCCGCTTGAGCACAAGCAGGCACCAAGAATTAACCGCGTACACATTGGTTTAGTGCAGTTAAGCACAGACCACA
GTCTAGAAATGGACTGGGCTAAGTTACTCGGCACCCAAGCAGGCGTATTCAGCTCTCGCGTCTACTACTCAAGCGAAATG
ACTCCTGAAGCACTCGATAAAATCGCTAGCGGAATCGTTGAAGCGTCTGACTTGATCGCAACAGGTCTACCTATGGATGT
GATGGCATTTGGCTGCACATCAGCTTCAATCATTATCGGCGAAGAGAAGGTCGCGGGTCTATTGACTCAAAACCGTGGTG
ACATCCCAGCGACTAACCCATGGACTGCGGCAAAAGCGTCATTCAAGCATTTGAACGCAAAAAAAATCGCGGTGTTCTCT
CCATACCCAACTAGCGTTAACTACCCGCTATATCAGCAGCTAACAGATGCTGACTTTGACGTAGTCACTCTAGGTTCATT
GGGTATCGAACGCGATACAGACATCACCCTAGTGGCTAAAGAATCTATGTTCGCAGCGCTAGAGCAGATGCTAAAGGACT
CAGACGCAGAATTAGTATTTATGTCATGCACCAACTTACGCGTGCTTGATTACATCGAAGAGATCGAAGCCAAGTTCGGT
ATTCCAGTAGTGTGCAGTAACTCTGCCATGTTCTGGCATGCAATGCACCTGACCGGCAACGTGGCTCAATGCCCAGGTTA
CGGCAAACTACTTAATAATCAAACAGCTTAA

Upstream 100 bases:

>100_bases
TTCACGAAGAAAATATCGTGATCACCGAAAACGGTGCCGAGTGGTTAAGCAAACGCGCTGAACCAGAACTACTGATTATC
AAATAATTTTAATATAGCCA

Downstream 100 bases:

>100_bases
GCTGTTGACTACCAATTACAAATTGTTGGAAAAATAAAAATGACTAATACACAAAAAGGTTGGATGGCTGCGATTTTCGT
TGGTCTGTTATGGGGTATCC

Product: Asp/Glu racemase

Products: NA

Alternate protein names: AMDase [H]

Number of amino acids: Translated: 276; Mature: 276

Protein sequence:

>276_residues
MISPEGAGEIITEEHLIMMSFEAFTSFEQPLEHKQAPRINRVHIGLVQLSTDHSLEMDWAKLLGTQAGVFSSRVYYSSEM
TPEALDKIASGIVEASDLIATGLPMDVMAFGCTSASIIIGEEKVAGLLTQNRGDIPATNPWTAAKASFKHLNAKKIAVFS
PYPTSVNYPLYQQLTDADFDVVTLGSLGIERDTDITLVAKESMFAALEQMLKDSDAELVFMSCTNLRVLDYIEEIEAKFG
IPVVCSNSAMFWHAMHLTGNVAQCPGYGKLLNNQTA

Sequences:

>Translated_276_residues
MISPEGAGEIITEEHLIMMSFEAFTSFEQPLEHKQAPRINRVHIGLVQLSTDHSLEMDWAKLLGTQAGVFSSRVYYSSEM
TPEALDKIASGIVEASDLIATGLPMDVMAFGCTSASIIIGEEKVAGLLTQNRGDIPATNPWTAAKASFKHLNAKKIAVFS
PYPTSVNYPLYQQLTDADFDVVTLGSLGIERDTDITLVAKESMFAALEQMLKDSDAELVFMSCTNLRVLDYIEEIEAKFG
IPVVCSNSAMFWHAMHLTGNVAQCPGYGKLLNNQTA
>Mature_276_residues
MISPEGAGEIITEEHLIMMSFEAFTSFEQPLEHKQAPRINRVHIGLVQLSTDHSLEMDWAKLLGTQAGVFSSRVYYSSEM
TPEALDKIASGIVEASDLIATGLPMDVMAFGCTSASIIIGEEKVAGLLTQNRGDIPATNPWTAAKASFKHLNAKKIAVFS
PYPTSVNYPLYQQLTDADFDVVTLGSLGIERDTDITLVAKESMFAALEQMLKDSDAELVFMSCTNLRVLDYIEEIEAKFG
IPVVCSNSAMFWHAMHLTGNVAQCPGYGKLLNNQTA

Specific function: Unknown

COG id: COG3473

COG function: function code Q; Maleate cis-trans isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =4.1.1.76 [H]

Molecular weight: Translated: 30162; Mature: 30162

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISPEGAGEIITEEHLIMMSFEAFTSFEQPLEHKQAPRINRVHIGLVQLSTDHSLEMDWA
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHH
KLLGTQAGVFSSRVYYSSEMTPEALDKIASGIVEASDLIATGLPMDVMAFGCTSASIIIG
HHHCCCCCHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEC
EEKVAGLLTQNRGDIPATNPWTAAKASFKHLNAKKIAVFSPYPTSVNYPLYQQLTDADFD
CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCC
VVTLGSLGIERDTDITLVAKESMFAALEQMLKDSDAELVFMSCTNLRVLDYIEEIEAKFG
EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCC
IPVVCSNSAMFWHAMHLTGNVAQCPGYGKLLNNQTA
CCEEECCCEEEEEEEECCCCHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MISPEGAGEIITEEHLIMMSFEAFTSFEQPLEHKQAPRINRVHIGLVQLSTDHSLEMDWA
CCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCHHHH
KLLGTQAGVFSSRVYYSSEMTPEALDKIASGIVEASDLIATGLPMDVMAFGCTSASIIIG
HHHCCCCCHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEEC
EEKVAGLLTQNRGDIPATNPWTAAKASFKHLNAKKIAVFSPYPTSVNYPLYQQLTDADFD
CHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHCCCCCC
VVTLGSLGIERDTDITLVAKESMFAALEQMLKDSDAELVFMSCTNLRVLDYIEEIEAKFG
EEEECCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHCC
IPVVCSNSAMFWHAMHLTGNVAQCPGYGKLLNNQTA
CCEEECCCEEEEEEEECCCCHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1369144 [H]