Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963878

Identifier: 157963878

GI number: 157963878

Start: 4944484

End: 4944966

Strand: Direct

Name: 157963878

Synonym: Spea_4067

Alternate gene names: NA

Gene position: 4944484-4944966 (Clockwise)

Preceding gene: 157963877

Following gene: 157963879

Centisome position: 95.55

GC content: 52.38

Gene sequence:

>483_bases
ATGTTACTTCGAACCCGCCTAGTCATAGGCTTTAGCATTATCATCCACAGCCAGCTTGGCTTTGGCACACAAGCCGATAA
CCCAAGCCTCGAGTTAGGCAGCGTGCTTAACGATAAGGGACAGCCCATTCGCGTCCCCAGCGAAACTCACAGTGATTTCA
ATTATTCGCCGCCGACCATTGAAGGTTCCTCGCCAGCCTCAACGCAAATCAACAAGAGTAAAAAGAAACCATCTAAGCAG
GCCAAAGCTAAGAGTCGCAAACAACAGCTCGCCAGTCGCAGCAGCGTAGCCAACAACCCGAGTTGTCGCTGGCTTAATAG
CCGCATGAACAGCCTAGAGAAGCATCTTAGTGCCGGAGTGAACTCACGCAATAGACACTATCAACAGGAGCTCGACATCC
GCCAGCAAGAGTGGCAGTGCATGAAATGCGGTGCCGAAGGGCCTGAGCAGAGCGATCACGCATCTTGTCAGTACAGGCGG
TAG

Upstream 100 bases:

>100_bases
GCTTTTGCTCGGCTACACTTCGCCATGCAAGAGATAATTCAATATCTTAATATGCATAACAGATTACACGGACAGTAATC
TTAAATCAGAGGAACAGGGA

Downstream 100 bases:

>100_bases
CAGCACAATATACAGAGTCTATTAGCTCAATGAGCTGACTTGAAGCAGGCATAGGACGTCCCCATTTAATAAGCTAAGAG
CGAGCATTGTTCAGCGTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTIEGSSPASTQINKSKKKPSKQ
AKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGVNSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR

Sequences:

>Translated_160_residues
MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTIEGSSPASTQINKSKKKPSKQ
AKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGVNSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR
>Mature_160_residues
MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTIEGSSPASTQINKSKKKPSKQ
AKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGVNSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17935; Mature: 17935

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTI
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCC
EGSSPASTQINKSKKKPSKQAKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGV
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
NSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTI
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCC
EGSSPASTQINKSKKKPSKQAKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGV
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC
NSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA