| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963878
Identifier: 157963878
GI number: 157963878
Start: 4944484
End: 4944966
Strand: Direct
Name: 157963878
Synonym: Spea_4067
Alternate gene names: NA
Gene position: 4944484-4944966 (Clockwise)
Preceding gene: 157963877
Following gene: 157963879
Centisome position: 95.55
GC content: 52.38
Gene sequence:
>483_bases ATGTTACTTCGAACCCGCCTAGTCATAGGCTTTAGCATTATCATCCACAGCCAGCTTGGCTTTGGCACACAAGCCGATAA CCCAAGCCTCGAGTTAGGCAGCGTGCTTAACGATAAGGGACAGCCCATTCGCGTCCCCAGCGAAACTCACAGTGATTTCA ATTATTCGCCGCCGACCATTGAAGGTTCCTCGCCAGCCTCAACGCAAATCAACAAGAGTAAAAAGAAACCATCTAAGCAG GCCAAAGCTAAGAGTCGCAAACAACAGCTCGCCAGTCGCAGCAGCGTAGCCAACAACCCGAGTTGTCGCTGGCTTAATAG CCGCATGAACAGCCTAGAGAAGCATCTTAGTGCCGGAGTGAACTCACGCAATAGACACTATCAACAGGAGCTCGACATCC GCCAGCAAGAGTGGCAGTGCATGAAATGCGGTGCCGAAGGGCCTGAGCAGAGCGATCACGCATCTTGTCAGTACAGGCGG TAG
Upstream 100 bases:
>100_bases GCTTTTGCTCGGCTACACTTCGCCATGCAAGAGATAATTCAATATCTTAATATGCATAACAGATTACACGGACAGTAATC TTAAATCAGAGGAACAGGGA
Downstream 100 bases:
>100_bases CAGCACAATATACAGAGTCTATTAGCTCAATGAGCTGACTTGAAGCAGGCATAGGACGTCCCCATTTAATAAGCTAAGAG CGAGCATTGTTCAGCGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTIEGSSPASTQINKSKKKPSKQ AKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGVNSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR
Sequences:
>Translated_160_residues MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTIEGSSPASTQINKSKKKPSKQ AKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGVNSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR >Mature_160_residues MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTIEGSSPASTQINKSKKKPSKQ AKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGVNSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17935; Mature: 17935
Theoretical pI: Translated: 10.38; Mature: 10.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTI CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCC EGSSPASTQINKSKKKPSKQAKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGV CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC NSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLLRTRLVIGFSIIIHSQLGFGTQADNPSLELGSVLNDKGQPIRVPSETHSDFNYSPPTI CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCC EGSSPASTQINKSKKKPSKQAKAKSRKQQLASRSSVANNPSCRWLNSRMNSLEKHLSAGV CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCC NSRNRHYQQELDIRQQEWQCMKCGAEGPEQSDHASCQYRR CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA