| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963857
Identifier: 157963857
GI number: 157963857
Start: 4914603
End: 4915862
Strand: Reverse
Name: 157963857
Synonym: Spea_4046
Alternate gene names: NA
Gene position: 4915862-4914603 (Counterclockwise)
Preceding gene: 157963858
Following gene: 157963849
Centisome position: 95.0
GC content: 40.87
Gene sequence:
>1260_bases GTGAACATAACGGCTAGTATTCAAGATGCAGTATTAACACCATTTACTCGAAGTATTTATCAAAAAGCATCCCTAGTTAT TGGTTTAGGGTTACTGATTTGCTCCTGCTTTTATGATGCTCAGGCTTTCTCGATAGTGTTGACTGGTTTAGTCACTGTTT ACGTTATTGTCAGTTTTGCTTTTAAACCTAAGTTACGACAGCATATTTACCTTAAAGGTGATTCGCTGCGGGTATTAAAG TCGGCGCGAATGTCTGGCTTTGATAAATGGGTATTTGGGTTTTCCATAGTGATTGCCGCAGTGAGTAATACCTATGCTTT GGCGAATATCACCATGGTAATGGTTGGTATTGTGGCATATCAAATATGCCTATTTTCATCGGTCTACAGACGGTTGCATC GGCGAGATGAGCTTGTTTTGCCTTTGACTGAGAAGTATTTATTGCTCAAGAACAAGCAGTCTAACTGTTTGCTGCTGCAA AGGTTTGATATCTATTTATTAAAACAGCCTATTGAAGAAGTACAGCAAGCAGCTGAGGTTTTAACTTCGCAAAGCGAAGT CGTTGAACAAGCTATTGAGTTTGTAGGCAGTATCTCACTAGAAGAGGAACCATTCGAAGGTGATGATGCTGAGGCTATCA TTGCACAGCTAAACCAGCATCTATCAATAACAATAGGGAATACTGTGACTAAAAAGTCATGGCGAGCCAGTGTAAAACCA TTTCTATTTGCTATGGCTGGCCTATACACCTATGTGTTCTTGCTACCTGACTTGTTTAAAGCAATCTTCCCCGTGGGCCG TTATCGAAATAAATTTGGTGATGTCATTTATCGGACTGAATCTATGTCAGATTTGGGAGTGATCTTTATGATGGTCATTA TGTTTATTATGCTCGCTTTACCTTGTTTCGCTTACTTATTTAGCTTTTATAGTGACGTTAAATCTCGCTCCTTTAAGGCC GTTTGCACCACTAAAGATGCAATTTGGCTGCTAACTCCCGCTATTAGTGGTCATGAATCGAGAGAGATATTACGCGCTGA AATGGCTCACATCAGCTGGGCTGATGTTCAAGCAGGGGCGGAAGATGTAGGCCCTCCGCGTTTATCTATCGATGGTGATA TCAAGCTCATTGGCAATGACAATCAACTCATTTCATTAAATGGTTGGGCTTGGAGCGGACGATTCATTCTTAATCATTTA GTTAAACTGGGGCTGCCAGTGAGATTAGTACGGCAAGATAATCAGCTAAAAGTCGAGTAG
Upstream 100 bases:
>100_bases CTGACACTATGAGAACATAAAAAATAATGCTTATATTCAAGATGCTTGAGTCTGCAGCAAAGCAATACAGCAAGCGGCGG GATTAATGTGAGAAGAATAA
Downstream 100 bases:
>100_bases CCAAGTACATTTATGGATTTACTCGCTCAAAACCTAGCTGGGTAAGGCATTGGTGATAACTAACATTAAAAAAGCCTAGC TATTTTAGCTAGGCTTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNITASIQDAVLTPFTRSIYQKASLVIGLGLLICSCFYDAQAFSIVLTGLVTVYVIVSFAFKPKLRQHIYLKGDSLRVLK SARMSGFDKWVFGFSIVIAAVSNTYALANITMVMVGIVAYQICLFSSVYRRLHRRDELVLPLTEKYLLLKNKQSNCLLLQ RFDIYLLKQPIEEVQQAAEVLTSQSEVVEQAIEFVGSISLEEEPFEGDDAEAIIAQLNQHLSITIGNTVTKKSWRASVKP FLFAMAGLYTYVFLLPDLFKAIFPVGRYRNKFGDVIYRTESMSDLGVIFMMVIMFIMLALPCFAYLFSFYSDVKSRSFKA VCTTKDAIWLLTPAISGHESREILRAEMAHISWADVQAGAEDVGPPRLSIDGDIKLIGNDNQLISLNGWAWSGRFILNHL VKLGLPVRLVRQDNQLKVE
Sequences:
>Translated_419_residues MNITASIQDAVLTPFTRSIYQKASLVIGLGLLICSCFYDAQAFSIVLTGLVTVYVIVSFAFKPKLRQHIYLKGDSLRVLK SARMSGFDKWVFGFSIVIAAVSNTYALANITMVMVGIVAYQICLFSSVYRRLHRRDELVLPLTEKYLLLKNKQSNCLLLQ RFDIYLLKQPIEEVQQAAEVLTSQSEVVEQAIEFVGSISLEEEPFEGDDAEAIIAQLNQHLSITIGNTVTKKSWRASVKP FLFAMAGLYTYVFLLPDLFKAIFPVGRYRNKFGDVIYRTESMSDLGVIFMMVIMFIMLALPCFAYLFSFYSDVKSRSFKA VCTTKDAIWLLTPAISGHESREILRAEMAHISWADVQAGAEDVGPPRLSIDGDIKLIGNDNQLISLNGWAWSGRFILNHL VKLGLPVRLVRQDNQLKVE >Mature_419_residues MNITASIQDAVLTPFTRSIYQKASLVIGLGLLICSCFYDAQAFSIVLTGLVTVYVIVSFAFKPKLRQHIYLKGDSLRVLK SARMSGFDKWVFGFSIVIAAVSNTYALANITMVMVGIVAYQICLFSSVYRRLHRRDELVLPLTEKYLLLKNKQSNCLLLQ RFDIYLLKQPIEEVQQAAEVLTSQSEVVEQAIEFVGSISLEEEPFEGDDAEAIIAQLNQHLSITIGNTVTKKSWRASVKP FLFAMAGLYTYVFLLPDLFKAIFPVGRYRNKFGDVIYRTESMSDLGVIFMMVIMFIMLALPCFAYLFSFYSDVKSRSFKA VCTTKDAIWLLTPAISGHESREILRAEMAHISWADVQAGAEDVGPPRLSIDGDIKLIGNDNQLISLNGWAWSGRFILNHL VKLGLPVRLVRQDNQLKVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47149; Mature: 47149
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNITASIQDAVLTPFTRSIYQKASLVIGLGLLICSCFYDAQAFSIVLTGLVTVYVIVSFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKPKLRQHIYLKGDSLRVLKSARMSGFDKWVFGFSIVIAAVSNTYALANITMVMVGIVAY HCCCHHHEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QICLFSSVYRRLHRRDELVLPLTEKYLLLKNKQSNCLLLQRFDIYLLKQPIEEVQQAAEV HHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHH LTSQSEVVEQAIEFVGSISLEEEPFEGDDAEAIIAQLNQHLSITIGNTVTKKSWRASVKP HHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH FLFAMAGLYTYVFLLPDLFKAIFPVGRYRNKFGDVIYRTESMSDLGVIFMMVIMFIMLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHH PCFAYLFSFYSDVKSRSFKAVCTTKDAIWLLTPAISGHESREILRAEMAHISWADVQAGA HHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCC EDVGPPRLSIDGDIKLIGNDNQLISLNGWAWSGRFILNHLVKLGLPVRLVRQDNQLKVE CCCCCCCEEECCCEEEEECCCCEEEECCCEECHHHHHHHHHHHCCCEEEEECCCCEECC >Mature Secondary Structure MNITASIQDAVLTPFTRSIYQKASLVIGLGLLICSCFYDAQAFSIVLTGLVTVYVIVSFA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FKPKLRQHIYLKGDSLRVLKSARMSGFDKWVFGFSIVIAAVSNTYALANITMVMVGIVAY HCCCHHHEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH QICLFSSVYRRLHRRDELVLPLTEKYLLLKNKQSNCLLLQRFDIYLLKQPIEEVQQAAEV HHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHH LTSQSEVVEQAIEFVGSISLEEEPFEGDDAEAIIAQLNQHLSITIGNTVTKKSWRASVKP HHCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHH FLFAMAGLYTYVFLLPDLFKAIFPVGRYRNKFGDVIYRTESMSDLGVIFMMVIMFIMLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHH PCFAYLFSFYSDVKSRSFKAVCTTKDAIWLLTPAISGHESREILRAEMAHISWADVQAGA HHHHHHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHHCCHHHHHCCC EDVGPPRLSIDGDIKLIGNDNQLISLNGWAWSGRFILNHLVKLGLPVRLVRQDNQLKVE CCCCCCCEEECCCEEEEECCCCEEEECCCEECHHHHHHHHHHHCCCEEEEECCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA