| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963797
Identifier: 157963797
GI number: 157963797
Start: 4841556
End: 4841972
Strand: Direct
Name: 157963797
Synonym: Spea_3986
Alternate gene names: NA
Gene position: 4841556-4841972 (Clockwise)
Preceding gene: 157963796
Following gene: 157963798
Centisome position: 93.56
GC content: 45.56
Gene sequence:
>417_bases ATGCTTAGCATAATCCGTCGCCATACATTGTTAGCCTTTACGCTACTCGCTTTGTTGAGTCAGCTAGTGCTATCTAATGG ATCGCTGATGGTACCCAATGCAATGGCTGATGATATGCCAATGATGAACATGCAATACGGAACAGAATGTCACCCAGTTC AAATGGATGAAGACACTCATTGCTGCGAAGCTGAAACACAAATGCAAATGCTTCCCGGCAACCCTCAGCCTTGCTGCAAC GGCAATGGATCATGCCAGAGTGACTGCAGCCATTGCTTGGTTATTTCTGTAACAGGTACCCTGTTTAGTGCATCACCTTG GCCAGGGTTTAGCACTTCCGAAATTGTAATGGCCACTCCTATGCCTCATTTCCACTCTATTTCATTGCCACAAGATTTAA GACCTCCAATCGCTTAA
Upstream 100 bases:
>100_bases AATAGGGATGGCACATTGAGCCAACAAAATTGTGAAGTTAATCAATGTGTCACTCTTTTCCTATGGTAGACTTAACCCAG TTTATTATTTTGGATACACC
Downstream 100 bases:
>100_bases ACAGAGACTCTGTGTCTCTTGCGAATACCTATTCGCACCTAAAAATCGATATTAATCTTAATCAGCAATTATTTTAGCCG TTAATTGTTCTGTTGCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 138; Mature: 138
Protein sequence:
>138_residues MLSIIRRHTLLAFTLLALLSQLVLSNGSLMVPNAMADDMPMMNMQYGTECHPVQMDEDTHCCEAETQMQMLPGNPQPCCN GNGSCQSDCSHCLVISVTGTLFSASPWPGFSTSEIVMATPMPHFHSISLPQDLRPPIA
Sequences:
>Translated_138_residues MLSIIRRHTLLAFTLLALLSQLVLSNGSLMVPNAMADDMPMMNMQYGTECHPVQMDEDTHCCEAETQMQMLPGNPQPCCN GNGSCQSDCSHCLVISVTGTLFSASPWPGFSTSEIVMATPMPHFHSISLPQDLRPPIA >Mature_138_residues MLSIIRRHTLLAFTLLALLSQLVLSNGSLMVPNAMADDMPMMNMQYGTECHPVQMDEDTHCCEAETQMQMLPGNPQPCCN GNGSCQSDCSHCLVISVTGTLFSASPWPGFSTSEIVMATPMPHFHSISLPQDLRPPIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15024; Mature: 15024
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 8.7 %Met (Translated Protein) 14.5 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 8.7 %Met (Mature Protein) 14.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSIIRRHTLLAFTLLALLSQLVLSNGSLMVPNAMADDMPMMNMQYGTECHPVQMDEDTH CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC CCEAETQMQMLPGNPQPCCNGNGSCQSDCSHCLVISVTGTLFSASPWPGFSTSEIVMATP CCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCEEEECC MPHFHSISLPQDLRPPIA CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLSIIRRHTLLAFTLLALLSQLVLSNGSLMVPNAMADDMPMMNMQYGTECHPVQMDEDTH CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCC CCEAETQMQMLPGNPQPCCNGNGSCQSDCSHCLVISVTGTLFSASPWPGFSTSEIVMATP CCCCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCCCCCCEEEECC MPHFHSISLPQDLRPPIA CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA