| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963796
Identifier: 157963796
GI number: 157963796
Start: 4841018
End: 4841437
Strand: Direct
Name: 157963796
Synonym: Spea_3985
Alternate gene names: NA
Gene position: 4841018-4841437 (Clockwise)
Preceding gene: 157963795
Following gene: 157963797
Centisome position: 93.55
GC content: 41.9
Gene sequence:
>420_bases ATGAAAAAATTTATCAGCGTAATCGCACTATCAATTGCAAGTTTCGCATCTCAAGCCGCCTCAGTGTCTTTTCCTGAATC GATTGAAGTCTTAGCCGTTAATGGATTAAGTAACGTCGATAGCCGTTACCTAGAGCTAGATCAGGGGCAGAACCTGATTG AAGTTCAATACCGTGACTTGTTTGAAACCAACGCCGAAGATTCGAACTGGGTAAGGTCTGAACCACTGTATCTCTATATC GACCTTGAAACTACGGCCAACTATAAGGCGTTCACACCGAATATAGTGTCTGAAGAAGATGCCTATCTATTCATCGACAA TCCAACCATTAAACTTAACGATGGAATGGGCAGTGAGAAACAGGTCAGCCTAATGACTCACGGCCAACTTATGACAAAAT TACTGCTATCAAAACAGTAA
Upstream 100 bases:
>100_bases TCGAAATTGATATCGAATTCTATAACTGGGCTAGGGCTATCAGTCTTAAGGTAAAGCACTGATTGCCATATCAATTATCT GACTTTGTTTGGAGTCTATT
Downstream 100 bases:
>100_bases AGTAGTTATCTATTCTGAAATAGGGATGGCACATTGAGCCAACAAAATTGTGAAGTTAATCAATGTGTCACTCTTTTCCT ATGGTAGACTTAACCCAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MKKFISVIALSIASFASQAASVSFPESIEVLAVNGLSNVDSRYLELDQGQNLIEVQYRDLFETNAEDSNWVRSEPLYLYI DLETTANYKAFTPNIVSEEDAYLFIDNPTIKLNDGMGSEKQVSLMTHGQLMTKLLLSKQ
Sequences:
>Translated_139_residues MKKFISVIALSIASFASQAASVSFPESIEVLAVNGLSNVDSRYLELDQGQNLIEVQYRDLFETNAEDSNWVRSEPLYLYI DLETTANYKAFTPNIVSEEDAYLFIDNPTIKLNDGMGSEKQVSLMTHGQLMTKLLLSKQ >Mature_139_residues MKKFISVIALSIASFASQAASVSFPESIEVLAVNGLSNVDSRYLELDQGQNLIEVQYRDLFETNAEDSNWVRSEPLYLYI DLETTANYKAFTPNIVSEEDAYLFIDNPTIKLNDGMGSEKQVSLMTHGQLMTKLLLSKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15592; Mature: 15592
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFISVIALSIASFASQAASVSFPESIEVLAVNGLSNVDSRYLELDQGQNLIEVQYRDL CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHEEECCCCCCEEEEEEHHH FETNAEDSNWVRSEPLYLYIDLETTANYKAFTPNIVSEEDAYLFIDNPTIKLNDGMGSEK HHCCCCCCCCEECCCEEEEEEEECCCCCEEECCCCCCCCCCEEEECCCEEEEECCCCCCC QVSLMTHGQLMTKLLLSKQ EEEEEHHHHHHHHHHHCCC >Mature Secondary Structure MKKFISVIALSIASFASQAASVSFPESIEVLAVNGLSNVDSRYLELDQGQNLIEVQYRDL CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHEEECCCCCCEEEEEEHHH FETNAEDSNWVRSEPLYLYIDLETTANYKAFTPNIVSEEDAYLFIDNPTIKLNDGMGSEK HHCCCCCCCCEECCCEEEEEEEECCCCCEEECCCCCCCCCCEEEECCCEEEEECCCCCCC QVSLMTHGQLMTKLLLSKQ EEEEEHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA