| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963795
Identifier: 157963795
GI number: 157963795
Start: 4840385
End: 4840813
Strand: Direct
Name: 157963795
Synonym: Spea_3984
Alternate gene names: NA
Gene position: 4840385-4840813 (Clockwise)
Preceding gene: 157963793
Following gene: 157963796
Centisome position: 93.54
GC content: 44.76
Gene sequence:
>429_bases ATGCGCAAGCAAATAGCATATTTAGTCTTTTTCATCGCACTAGTTGGGCAATTTATTTTGTCTCCAGCGATGGCTATGCC TAAATATTTACATGCTAGCTCCCATGCAGAACAACATATCGAGCCCCAAGCATCACACTTGCAAACTTTGCTAACCGATA GTTTCGCCTCATCCCTTGGCGCTGATGAGCAGATGAACTGTGACTCTGAAATGCCAAATTTAAGTCTAGTCAAAATCGAC TGCGATGCCTTATGCGATATCTTAGGTGCAGGTAATTGTGTATCCCACTGTGTATCGGCGCCAGGGATTATCGAACAGCA TCAATTGAGTCTGAACTATCTCAACTCGACAGCCAGTGTACAAACCAGCTTTTGGTCTCCTCAGACCGTTGAACTTTCGT CCGCGAATCCCCCTCCCATCAGTATTTAA
Upstream 100 bases:
>100_bases CGGCCATAAAAACAAAAAAGTTATGATTTTTGAAACTATTTCAATAGAACTTAGGTCTATTGAATTACATCGGGTTTGTT ACATCACTTTAAGGTCTGGC
Downstream 100 bases:
>100_bases GCTGTAACTCATCTTTAGCTATTTGCAAAGGCTAGTGACTAAATCCACTCTAAGTATTACCTACAAATAGCCATCTACAG AATCATCAGCCTGTGGTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MRKQIAYLVFFIALVGQFILSPAMAMPKYLHASSHAEQHIEPQASHLQTLLTDSFASSLGADEQMNCDSEMPNLSLVKID CDALCDILGAGNCVSHCVSAPGIIEQHQLSLNYLNSTASVQTSFWSPQTVELSSANPPPISI
Sequences:
>Translated_142_residues MRKQIAYLVFFIALVGQFILSPAMAMPKYLHASSHAEQHIEPQASHLQTLLTDSFASSLGADEQMNCDSEMPNLSLVKID CDALCDILGAGNCVSHCVSAPGIIEQHQLSLNYLNSTASVQTSFWSPQTVELSSANPPPISI >Mature_142_residues MRKQIAYLVFFIALVGQFILSPAMAMPKYLHASSHAEQHIEPQASHLQTLLTDSFASSLGADEQMNCDSEMPNLSLVKID CDALCDILGAGNCVSHCVSAPGIIEQHQLSLNYLNSTASVQTSFWSPQTVELSSANPPPISI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15347; Mature: 15347
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKQIAYLVFFIALVGQFILSPAMAMPKYLHASSHAEQHIEPQASHLQTLLTDSFASSLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC ADEQMNCDSEMPNLSLVKIDCDALCDILGAGNCVSHCVSAPGIIEQHQLSLNYLNSTASV CCCCCCCCCCCCCCEEEEECHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHH QTSFWSPQTVELSSANPPPISI EECCCCCCEEEECCCCCCCCCC >Mature Secondary Structure MRKQIAYLVFFIALVGQFILSPAMAMPKYLHASSHAEQHIEPQASHLQTLLTDSFASSLG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC ADEQMNCDSEMPNLSLVKIDCDALCDILGAGNCVSHCVSAPGIIEQHQLSLNYLNSTASV CCCCCCCCCCCCCCEEEEECHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHH QTSFWSPQTVELSSANPPPISI EECCCCCCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA