| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is cctA [H]
Identifier: 157963775
GI number: 157963775
Start: 4819023
End: 4819313
Strand: Reverse
Name: cctA [H]
Synonym: Spea_3964
Alternate gene names: 157963775
Gene position: 4819313-4819023 (Counterclockwise)
Preceding gene: 157963776
Following gene: 157963772
Centisome position: 93.13
GC content: 44.67
Gene sequence:
>291_bases ATGCTTAAAGTTTTAGGATTAACAGTTTTATTGAGCTTTTCGGGTGTAGTGATGGCAACTTCAGTTGCTGACTCACATAC AGAGATGGCAGGTTGTGAGTCATGCCATAAAGATGGTGATCCATCGGCGGATATGACATATGAGAATGAAACCTGTGTGA GCTGTCATGGCTCATTGAAAGAGCTTGATGGTGAGATGCATCTGCAGCATGACGGTATCATTACTTGTAGTGACTGCCAT GTTGTGCACGAGGAGGTTTCGGCTAACGATAGCTGTGCAAGCTGCCACTAA
Upstream 100 bases:
>100_bases TACTGCCAGCTGCAGTTTAATCGGCGTACTTTTACTGCGTAACTTCATTCTTTATACCGGCCAAATGACGGTTGCTTAAT TATTTACTGAGGGTTTGAAC
Downstream 100 bases:
>100_bases AAGTCTTTATATAAGAAATTGAGAAAAGAGTTGTAAAAACAACTCCATGCTTCGCAAGGACGCTTCTGGGCAGGATGCCA TTTTAGCAACTTAGTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome c3 [H]
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MLKVLGLTVLLSFSGVVMATSVADSHTEMAGCESCHKDGDPSADMTYENETCVSCHGSLKELDGEMHLQHDGIITCSDCH VVHEEVSANDSCASCH
Sequences:
>Translated_96_residues MLKVLGLTVLLSFSGVVMATSVADSHTEMAGCESCHKDGDPSADMTYENETCVSCHGSLKELDGEMHLQHDGIITCSDCH VVHEEVSANDSCASCH >Mature_96_residues MLKVLGLTVLLSFSGVVMATSVADSHTEMAGCESCHKDGDPSADMTYENETCVSCHGSLKELDGEMHLQHDGIITCSDCH VVHEEVSANDSCASCH
Specific function: Transfers electrons to ferredoxin III [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011031 - InterPro: IPR012286 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10199; Mature: 10199
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS51008 MULTIHEME_CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 13.5 %Cys+Met (Translated Protein) 8.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 13.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVLGLTVLLSFSGVVMATSVADSHTEMAGCESCHKDGDPSADMTYENETCVSCHGSLK CCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCCEEEECCCCHH ELDGEMHLQHDGIITCSDCHVVHEEVSANDSCASCH HCCCEEEECCCCEEEECCCCEEHHHHCCCCCCCCCC >Mature Secondary Structure MLKVLGLTVLLSFSGVVMATSVADSHTEMAGCESCHKDGDPSADMTYENETCVSCHGSLK CCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEECCCEEEECCCCHH ELDGEMHLQHDGIITCSDCHVVHEEVSANDSCASCH HCCCEEEECCCCEEEECCCCEEHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11231004 [H]