| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963772
Identifier: 157963772
GI number: 157963772
Start: 4816487
End: 4817221
Strand: Reverse
Name: 157963772
Synonym: Spea_3961
Alternate gene names: NA
Gene position: 4817221-4816487 (Counterclockwise)
Preceding gene: 157963775
Following gene: 157963771
Centisome position: 93.09
GC content: 43.67
Gene sequence:
>735_bases ATGCCATTGTCAGCAATATTGACTCAAGCTTTTAACTTTTTTCGAAACAATATTAGTCAGTTAGCGTTTTTGTTTGTACC GATTTTATTTGTGCAGGTTGGTATACAGCTATGGCTAAGCTTAGAAATTAGTGCCGCAGATTTCGAAAACCCTCAATTTG GTACCAGCCACATGGTCGCCATGATGGTACTACTGCTAGTGTTCTCGTTCTTGATTGCGGCATTAACGCTATTTTTAGAG ATCCGTTCTCAGGGCCATAGTCCATCGAATGGCTTGATCTTGAAGACCAGTTTGAACTTTGTGCCAGCACTCTTGTTGGC AGGGGTGTTTTCGGGTCTTGCGGTACTTGCGCCTGTGTTTATTCTGCTCGCAGTTAACCCTACTCTGGGCATTATTGGTT TAGTGGGTAGCATCTATCTGTTCGCGCGTTTGGCGTTCGTTAATTTTATGGTCGTGGTTGAGCGTCTTACTCCAATGGAA GCGATTAAGCGCAGCTTTAGTTTTAGTGGTCCTATCGCTTTTAAAACGATACTAGTGTTATTGCTATATATTCCTCTATC GCTATTTGGCGGTATGTTAGCGCAGCTAACTCAGCTAGGTGGTATGCCGACACAGCTTATTGGTGAAGTCATCGTGGCCT TTTTTGGCCTATTCGTGAACGTGGCGTTATTCCGTCTATATATGGTGTCACGTCCAACGCCTGATTCACCGGGCAATATT CAAAACGAAGAATAA
Upstream 100 bases:
>100_bases ACTAGCGAGTAATTGGTGATTTCAACTGTGCATTAATTTCCAAACTTGGGTATCCTTAGCTTTAACTCGTGTTATTGAAT TTTATCTTTTGGAAAGCCCT
Downstream 100 bases:
>100_bases TATTCCTGAATAGGGATTTGTTCTCTGGGATTGCAGCGACTTACTTTGTGTAATAGCTGCAATGCCTAGCCTGTTATCTG AAAAGCTTAGGGTTATTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MPLSAILTQAFNFFRNNISQLAFLFVPILFVQVGIQLWLSLEISAADFENPQFGTSHMVAMMVLLLVFSFLIAALTLFLE IRSQGHSPSNGLILKTSLNFVPALLLAGVFSGLAVLAPVFILLAVNPTLGIIGLVGSIYLFARLAFVNFMVVVERLTPME AIKRSFSFSGPIAFKTILVLLLYIPLSLFGGMLAQLTQLGGMPTQLIGEVIVAFFGLFVNVALFRLYMVSRPTPDSPGNI QNEE
Sequences:
>Translated_244_residues MPLSAILTQAFNFFRNNISQLAFLFVPILFVQVGIQLWLSLEISAADFENPQFGTSHMVAMMVLLLVFSFLIAALTLFLE IRSQGHSPSNGLILKTSLNFVPALLLAGVFSGLAVLAPVFILLAVNPTLGIIGLVGSIYLFARLAFVNFMVVVERLTPME AIKRSFSFSGPIAFKTILVLLLYIPLSLFGGMLAQLTQLGGMPTQLIGEVIVAFFGLFVNVALFRLYMVSRPTPDSPGNI QNEE >Mature_243_residues PLSAILTQAFNFFRNNISQLAFLFVPILFVQVGIQLWLSLEISAADFENPQFGTSHMVAMMVLLLVFSFLIAALTLFLEI RSQGHSPSNGLILKTSLNFVPALLLAGVFSGLAVLAPVFILLAVNPTLGIIGLVGSIYLFARLAFVNFMVVVERLTPMEA IKRSFSFSGPIAFKTILVLLLYIPLSLFGGMLAQLTQLGGMPTQLIGEVIVAFFGLFVNVALFRLYMVSRPTPDSPGNIQ NEE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26632; Mature: 26501
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: PS00456 NA_SOLUT_SYMP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSAILTQAFNFFRNNISQLAFLFVPILFVQVGIQLWLSLEISAADFENPQFGTSHMVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHH MMVLLLVFSFLIAALTLFLEIRSQGHSPSNGLILKTSLNFVPALLLAGVFSGLAVLAPVF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ILLAVNPTLGIIGLVGSIYLFARLAFVNFMVVVERLTPMEAIKRSFSFSGPIAFKTILVL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHH LLYIPLSLFGGMLAQLTQLGGMPTQLIGEVIVAFFGLFVNVALFRLYMVSRPTPDSPGNI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QNEE CCCC >Mature Secondary Structure PLSAILTQAFNFFRNNISQLAFLFVPILFVQVGIQLWLSLEISAADFENPQFGTSHMVA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHH MMVLLLVFSFLIAALTLFLEIRSQGHSPSNGLILKTSLNFVPALLLAGVFSGLAVLAPVF HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH ILLAVNPTLGIIGLVGSIYLFARLAFVNFMVVVERLTPMEAIKRSFSFSGPIAFKTILVL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHH LLYIPLSLFGGMLAQLTQLGGMPTQLIGEVIVAFFGLFVNVALFRLYMVSRPTPDSPGNI HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC QNEE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA