| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963766
Identifier: 157963766
GI number: 157963766
Start: 4809422
End: 4810438
Strand: Direct
Name: 157963766
Synonym: Spea_3955
Alternate gene names: NA
Gene position: 4809422-4810438 (Clockwise)
Preceding gene: 157963764
Following gene: 157963768
Centisome position: 92.94
GC content: 40.51
Gene sequence:
>1017_bases ATGAACAACAAAACACTTTCGGTGGCTATATTATCCAGCCTCATTGCCTGTAACGCTCTCGCAAACGATATTCCAACTCA AACAAATAGCAGCTATCAACACGAATTAAATCTTGCCCTCGGTACCTATAGTGATGATTTTGGCGATGGTATATGGGACT TAGGTTATCGCTACTATTTTTCCCCAGTTGATATAACTAAAACCCCCTACGCCCTGAATGGAATCCTTGCACAAGCTTCA AATATCGGCGTTCAATACGCTCAAATGCAAATAATTGATGACGCAGACCTCTATCAAATAGATGCTACATATGTATTTGA TTCAAAATGGTTTGTAAAAGGGATGTATGAGAAGGATGACAGTGACAGTCAATACACAACTCTAGATGAAAGCCAAGATA GCTATCATTTTAGCTTAGGCTACTATTTTAACGACACCTCAGAAGTTTCTATTTACTATGGAAACGCTAGGAGTTCAGAT AATTATCATCATACAATTGACCTTAATGCATCAGAGGTCGGCTTCAGATATCAAGGTGATTTTGATTCCCAGACAGATAC ATATGGGGTACAGGCCCGTAGCTTTATGCCGATGCAATCATTTGCAGGCATAGAACTAGCAGGGTTTTGGCAATATAGTC AAAATGATCATCGTAATGCCACCAGCTATTACGATGGCAATTCAGAAGAGTCGGGAAGCTATCAATATGACTCAAATACA GATCGTCATTTAGTTCACCTTGCTACTGACTTTTATATTAACAAATCATGGTCAGTGGGCGGTGAATATTCATGGCAAAA TTTTGACCGCAAAACTATATTTAATCACAGTCAACAAAGCGGCCCTTCTCGATATAGCGATGATGGTAGCGACAGCCTTT ACGCCATCAATACCGCCTATTGGTGGCAATTCTCAAATCTTTTCACAGCCAACGCTTCTGTAGCTAAATACTTCGATGAC GAAGGTGACTCGCCTGATGGAGTTTTCTTCCGTCTGGCCATTAACGCCCGTTTCTAA
Upstream 100 bases:
>100_bases TTGCTAATGCAGTTGCTTCGCTATTTATCCCATAGGTGAACTAAGTCAGCTTAAACATCACAGGAGGCTAGCAAGTTAAG GCCTCAAACAAGGACGTAAA
Downstream 100 bases:
>100_bases TACCAATAATTAAAAAAAAGCCTGCCCAGATGGTTAGTCTGTGCAGGCTAAAGTGTTTCAGGGTGAAACAAAGTTAACTG TTACTGTTTACTATCGGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MNNKTLSVAILSSLIACNALANDIPTQTNSSYQHELNLALGTYSDDFGDGIWDLGYRYYFSPVDITKTPYALNGILAQAS NIGVQYAQMQIIDDADLYQIDATYVFDSKWFVKGMYEKDDSDSQYTTLDESQDSYHFSLGYYFNDTSEVSIYYGNARSSD NYHHTIDLNASEVGFRYQGDFDSQTDTYGVQARSFMPMQSFAGIELAGFWQYSQNDHRNATSYYDGNSEESGSYQYDSNT DRHLVHLATDFYINKSWSVGGEYSWQNFDRKTIFNHSQQSGPSRYSDDGSDSLYAINTAYWWQFSNLFTANASVAKYFDD EGDSPDGVFFRLAINARF
Sequences:
>Translated_338_residues MNNKTLSVAILSSLIACNALANDIPTQTNSSYQHELNLALGTYSDDFGDGIWDLGYRYYFSPVDITKTPYALNGILAQAS NIGVQYAQMQIIDDADLYQIDATYVFDSKWFVKGMYEKDDSDSQYTTLDESQDSYHFSLGYYFNDTSEVSIYYGNARSSD NYHHTIDLNASEVGFRYQGDFDSQTDTYGVQARSFMPMQSFAGIELAGFWQYSQNDHRNATSYYDGNSEESGSYQYDSNT DRHLVHLATDFYINKSWSVGGEYSWQNFDRKTIFNHSQQSGPSRYSDDGSDSLYAINTAYWWQFSNLFTANASVAKYFDD EGDSPDGVFFRLAINARF >Mature_338_residues MNNKTLSVAILSSLIACNALANDIPTQTNSSYQHELNLALGTYSDDFGDGIWDLGYRYYFSPVDITKTPYALNGILAQAS NIGVQYAQMQIIDDADLYQIDATYVFDSKWFVKGMYEKDDSDSQYTTLDESQDSYHFSLGYYFNDTSEVSIYYGNARSSD NYHHTIDLNASEVGFRYQGDFDSQTDTYGVQARSFMPMQSFAGIELAGFWQYSQNDHRNATSYYDGNSEESGSYQYDSNT DRHLVHLATDFYINKSWSVGGEYSWQNFDRKTIFNHSQQSGPSRYSDDGSDSLYAINTAYWWQFSNLFTANASVAKYFDD EGDSPDGVFFRLAINARF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38506; Mature: 38506
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNKTLSVAILSSLIACNALANDIPTQTNSSYQHELNLALGTYSDDFGDGIWDLGYRYYF CCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCEEEEE SPVDITKTPYALNGILAQASNIGVQYAQMQIIDDADLYQIDATYVFDSKWFVKGMYEKDD CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCC SDSQYTTLDESQDSYHFSLGYYFNDTSEVSIYYGNARSSDNYHHTIDLNASEVGFRYQGD CCCCEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCHHHCCEEEECC FDSQTDTYGVQARSFMPMQSFAGIELAGFWQYSQNDHRNATSYYDGNSEESGSYQYDSNT CCCCCCCCCEEHHCCCCHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCC DRHLVHLATDFYINKSWSVGGEYSWQNFDRKTIFNHSQQSGPSRYSDDGSDSLYAINTAY CCEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE WWQFSNLFTANASVAKYFDDEGDSPDGVFFRLAINARF EEEECCEEECCCHHEEHCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure MNNKTLSVAILSSLIACNALANDIPTQTNSSYQHELNLALGTYSDDFGDGIWDLGYRYYF CCCCEEEHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCCCCCCHHHCCEEEEE SPVDITKTPYALNGILAQASNIGVQYAQMQIIDDADLYQIDATYVFDSKWFVKGMYEKDD CCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEEECCCEEEEEECCCCC SDSQYTTLDESQDSYHFSLGYYFNDTSEVSIYYGNARSSDNYHHTIDLNASEVGFRYQGD CCCCEEEECCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCEEEEECCHHHCCEEEECC FDSQTDTYGVQARSFMPMQSFAGIELAGFWQYSQNDHRNATSYYDGNSEESGSYQYDSNT CCCCCCCCCEEHHCCCCHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEECCCCC DRHLVHLATDFYINKSWSVGGEYSWQNFDRKTIFNHSQQSGPSRYSDDGSDSLYAINTAY CCEEEEEEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCEEEEEEEE WWQFSNLFTANASVAKYFDDEGDSPDGVFFRLAINARF EEEECCEEECCCHHEEHCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA