| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963748
Identifier: 157963748
GI number: 157963748
Start: 4785588
End: 4786832
Strand: Reverse
Name: 157963748
Synonym: Spea_3937
Alternate gene names: NA
Gene position: 4786832-4785588 (Counterclockwise)
Preceding gene: 157963749
Following gene: 157963746
Centisome position: 92.51
GC content: 43.21
Gene sequence:
>1245_bases ATGAAATACCAAATACTACTGGGATGTTTACTGGCATCAAATGGACTGGCTGCAGCTGAACTGCCTGACTTTTTAGATGC TAATGATATTAATAATGCTCAATTCCAATGTTTAGGCGAGTCGCCTAAATATAGCGGTGAAGATCAAAAGTATATCGATA TATTATGGGATGAAACTTTGACCTATTTACGTGCTTATGCCGCAGCGCTAACCAATGACCAAAATAGTGGTTGTTTGAAC TCTGACACGGCGATGGTAGATTCTACCGAAGGTGGCCAGAACATGTGCGTGATGGATCGCCGCGATATGAAGTTGATGGT AAAAAATATCTATCAAGTGCTTAATAATGCCGATGAAGCTAAAAAATGTTTCGGCGCTCGTGAAGATGTAAGCTGGATTT ATAGCCCAGGTGGAGAACTTGAGCAGCACTCGCCAGTAGCCCAGCATTTTAAACGCACTACTTTTGAAGAGTTTTTCGAT GAGAAAGTGACAAATAAAGAGGTTAAAGAGTACGGTAATAGCCTTACTAAGAACTTCTACAAGATGGTGACAGGTGATGA AGTGAAGATGCCAGCTGTATTCCCTTACGACATCAGCGCAAACTCTCTGCCAAATCTTTGGGCCACAGCAGGCTGGTTCC CTATGTACGCTGAAGAAAGTAAGCGTAACGATAAGAACTTTGACAATATTCGTGGTGGTTATGCCTACGCCGAGATTTTC GGTCACTGGGGCCTATTGCGTATTGATGAAATCAATGGCGAAAAGGTAGGGGCTGAAGTGGGTATGACTGTGCAAGCAGT GGATACTCTATATCCGTTCCATAATCATGCTGTGTCAGAAATGTACTACAACATGCGTGTGCCAGCCTGTACTAATCAGT TTAAAACCATGGCGATTCGTGAAGATTCGCCATTGATTACCACGGTTAAAGAAGACGACACCATGCGTCGAGTGCAGTTT GATGAAGGTCAGCATAATTCACAAACTATGTGGTTATCTGGTAGCAGCGAGCAAGATGCACTGATCTATTTTCACCAAAA TACCATTCATGCATTTGAGATTGATGGTAGCTGTGAAGCCAAGCCTGAAGAGCGTGCCATTGTCTCTGTTTGGGCGCGTA GTAACGCTCATGATACCCGTAATGATTATGGTACAACCTTACTTTGCGAATCAGCTGCAAACCCTGGAACGCCAGCTAAG CGCGGTGAAGTGATTCAATGTGATTTAACTAAAGTTAAATGGTAG
Upstream 100 bases:
>100_bases AAGCTATAAGTCTCGATGAGGTAGATTTTTGGAATTAATTCCACCTATATCATTTTAATTAATAAGCTGTTTTATAAAAA TCAAATATAGGGTGATGATA
Downstream 100 bases:
>100_bases TGCTAGTAAGCTGATTAAAATTAGATAGAAAAATGCCAACGACTTCGTTGGCATTTTTAATTTTAGCCCTAAACTACCTA CTTCAGTAGGGGCCGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKYQILLGCLLASNGLAAAELPDFLDANDINNAQFQCLGESPKYSGEDQKYIDILWDETLTYLRAYAAALTNDQNSGCLN SDTAMVDSTEGGQNMCVMDRRDMKLMVKNIYQVLNNADEAKKCFGAREDVSWIYSPGGELEQHSPVAQHFKRTTFEEFFD EKVTNKEVKEYGNSLTKNFYKMVTGDEVKMPAVFPYDISANSLPNLWATAGWFPMYAEESKRNDKNFDNIRGGYAYAEIF GHWGLLRIDEINGEKVGAEVGMTVQAVDTLYPFHNHAVSEMYYNMRVPACTNQFKTMAIREDSPLITTVKEDDTMRRVQF DEGQHNSQTMWLSGSSEQDALIYFHQNTIHAFEIDGSCEAKPEERAIVSVWARSNAHDTRNDYGTTLLCESAANPGTPAK RGEVIQCDLTKVKW
Sequences:
>Translated_414_residues MKYQILLGCLLASNGLAAAELPDFLDANDINNAQFQCLGESPKYSGEDQKYIDILWDETLTYLRAYAAALTNDQNSGCLN SDTAMVDSTEGGQNMCVMDRRDMKLMVKNIYQVLNNADEAKKCFGAREDVSWIYSPGGELEQHSPVAQHFKRTTFEEFFD EKVTNKEVKEYGNSLTKNFYKMVTGDEVKMPAVFPYDISANSLPNLWATAGWFPMYAEESKRNDKNFDNIRGGYAYAEIF GHWGLLRIDEINGEKVGAEVGMTVQAVDTLYPFHNHAVSEMYYNMRVPACTNQFKTMAIREDSPLITTVKEDDTMRRVQF DEGQHNSQTMWLSGSSEQDALIYFHQNTIHAFEIDGSCEAKPEERAIVSVWARSNAHDTRNDYGTTLLCESAANPGTPAK RGEVIQCDLTKVKW >Mature_414_residues MKYQILLGCLLASNGLAAAELPDFLDANDINNAQFQCLGESPKYSGEDQKYIDILWDETLTYLRAYAAALTNDQNSGCLN SDTAMVDSTEGGQNMCVMDRRDMKLMVKNIYQVLNNADEAKKCFGAREDVSWIYSPGGELEQHSPVAQHFKRTTFEEFFD EKVTNKEVKEYGNSLTKNFYKMVTGDEVKMPAVFPYDISANSLPNLWATAGWFPMYAEESKRNDKNFDNIRGGYAYAEIF GHWGLLRIDEINGEKVGAEVGMTVQAVDTLYPFHNHAVSEMYYNMRVPACTNQFKTMAIREDSPLITTVKEDDTMRRVQF DEGQHNSQTMWLSGSSEQDALIYFHQNTIHAFEIDGSCEAKPEERAIVSVWARSNAHDTRNDYGTTLLCESAANPGTPAK RGEVIQCDLTKVKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46785; Mature: 46785
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYQILLGCLLASNGLAAAELPDFLDANDINNAQFQCLGESPKYSGEDQKYIDILWDETL CCEEEEEEEHHHCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHH TYLRAYAAALTNDQNSGCLNSDTAMVDSTEGGQNMCVMDRRDMKLMVKNIYQVLNNADEA HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHH KKCFGAREDVSWIYSPGGELEQHSPVAQHFKRTTFEEFFDEKVTNKEVKEYGNSLTKNFY HHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KMVTGDEVKMPAVFPYDISANSLPNLWATAGWFPMYAEESKRNDKNFDNIRGGYAYAEIF HHHCCCCEECCEEECCCCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHH GHWGLLRIDEINGEKVGAEVGMTVQAVDTLYPFHNHAVSEMYYNMRVPACTNQFKTMAIR HCCCEEEEECCCCCCCCHHHCCEEEHHHHHCCHHHHHHHHHHHEEECCCCCCCCEEEEEE EDSPLITTVKEDDTMRRVQFDEGQHNSQTMWLSGSSEQDALIYFHQNTIHAFEIDGSCEA CCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEECCCCCC KPEERAIVSVWARSNAHDTRNDYGTTLLCESAANPGTPAKRGEVIQCDLTKVKW CCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MKYQILLGCLLASNGLAAAELPDFLDANDINNAQFQCLGESPKYSGEDQKYIDILWDETL CCEEEEEEEHHHCCCCCHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEHHHHHH TYLRAYAAALTNDQNSGCLNSDTAMVDSTEGGQNMCVMDRRDMKLMVKNIYQVLNNADEA HHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCHHH KKCFGAREDVSWIYSPGGELEQHSPVAQHFKRTTFEEFFDEKVTNKEVKEYGNSLTKNFY HHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH KMVTGDEVKMPAVFPYDISANSLPNLWATAGWFPMYAEESKRNDKNFDNIRGGYAYAEIF HHHCCCCEECCEEECCCCCCCCCCCHHHHCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHH GHWGLLRIDEINGEKVGAEVGMTVQAVDTLYPFHNHAVSEMYYNMRVPACTNQFKTMAIR HCCCEEEEECCCCCCCCHHHCCEEEHHHHHCCHHHHHHHHHHHEEECCCCCCCCEEEEEE EDSPLITTVKEDDTMRRVQFDEGQHNSQTMWLSGSSEQDALIYFHQNTIHAFEIDGSCEA CCCCEEEEECCCCCEEEEECCCCCCCCEEEEEECCCCCCEEEEEECCEEEEEEECCCCCC KPEERAIVSVWARSNAHDTRNDYGTTLLCESAANPGTPAKRGEVIQCDLTKVKW CCCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA