| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963734
Identifier: 157963734
GI number: 157963734
Start: 4771353
End: 4772525
Strand: Reverse
Name: 157963734
Synonym: Spea_3923
Alternate gene names: NA
Gene position: 4772525-4771353 (Counterclockwise)
Preceding gene: 157963738
Following gene: 157963733
Centisome position: 92.23
GC content: 49.36
Gene sequence:
>1173_bases ATGACGGGTAATACTCAAGCGTTCGATCATTGGATCCGTACTCGCTTTGTTGAGCTCAACAGTAAATTAGAATCCCTTTA CGCCCAGCAGGCTGACCGTGCGAATGTTGAAGGGGTGGGAGAAGATCTAAAATTTCAGCTTGAGTCTGAAGGGCGCGAGC TTATTGCCTGTTTGCTTGCAGAAGGGAATACCGACGAAGGTTTTGATCATGCGTTTGATCTGCTTGGTAATGTGGGCCTG TATATGGCGGCCTGTCGCAGACACGAGATCACAGAGCCCTCTAGGGAGAGAGTCTCACCGCTTACCGAAGCCTCAGCCCT CGCGATGCATATCGGTGCGTCTATTGGCGTGACCCCAAGATTTGCTACCGCTCACCTCACCACCCATAACCGTGCACATC AAGGTTTGTATAAGCGCTTCACCGATTTAGATGCCGAGCAGTTATTTGTCGACTACAACACCAAAGGCATATTGGCCTAT AAACGCGCCGCCGATGCGCTATTAAAGATCCAGCCATTAGGCATAGACCATCCGATTGCCTATGATCTGCTACTAGTCGC TAAGCGCGCGCTGCGGGATGTAATAGAGTCGAATCGCGTGCTGTTTCAACGACTCGATGCCGATGACTTCTTCTATTGTG TCAGACCCTATTACAAACCTTATCGCGTGGGGAGTCAGATCTATCGCGGCGCCAATGCAGGTGACTTTGCCGGTATTAAC GTCATCGATATGTTACTGGGCTTATGCAGCGCAAATGAGCCAGGCTACTCACAGATGTTGGTGGATAAGTTTCTCTATAT GATGCCTGAAGATCAGGCCATATTACGTGACTGTATGCGCCGCACTAGTTTTATGGATGAGTTACTTAACTTGAGCCACT TCAGTGCAGAGCCTTGGTATCAGCAGAACGTGAAGCTATTTTTAGAGGTGTGTGCCCTGCATGGTGAGACGGCCATTCAG CATCATAATGAGCTGGTGGCTAAATATATCGCCCAGCCCTCGAAAACCATGGAGCAGCAACATATGTCTAAGGTGACTGC GAGTGGCCCACCTTTGGATGTGCTGCTTAATTCATTAGAGAAGTTGCGTGATAGACGAGCCGCAGCTAAGCGCAGTGATA TTCGTACTCGCTATGAAGATATTCAATCGCTGCTCGCGAGTATGGAGGCGTAA
Upstream 100 bases:
>100_bases ATTGAAAGTTATCGGAGCTAATTTAATGATTTACACCGAACGTATGCTGCTAGGCTAACTAGAATCGGTTCATCTTCAAA ATAACAATAAGGACCTGCAG
Downstream 100 bases:
>100_bases TAGTATGCAGGACTTCAAAGCAGACTTTAGCTTAGCAAGCGGCAGTTATCTGCTTAATCACTCCGTTGGCAGGCCACTGA AGAGCGCCGAACAGGTTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MTGNTQAFDHWIRTRFVELNSKLESLYAQQADRANVEGVGEDLKFQLESEGRELIACLLAEGNTDEGFDHAFDLLGNVGL YMAACRRHEITEPSRERVSPLTEASALAMHIGASIGVTPRFATAHLTTHNRAHQGLYKRFTDLDAEQLFVDYNTKGILAY KRAADALLKIQPLGIDHPIAYDLLLVAKRALRDVIESNRVLFQRLDADDFFYCVRPYYKPYRVGSQIYRGANAGDFAGIN VIDMLLGLCSANEPGYSQMLVDKFLYMMPEDQAILRDCMRRTSFMDELLNLSHFSAEPWYQQNVKLFLEVCALHGETAIQ HHNELVAKYIAQPSKTMEQQHMSKVTASGPPLDVLLNSLEKLRDRRAAAKRSDIRTRYEDIQSLLASMEA
Sequences:
>Translated_390_residues MTGNTQAFDHWIRTRFVELNSKLESLYAQQADRANVEGVGEDLKFQLESEGRELIACLLAEGNTDEGFDHAFDLLGNVGL YMAACRRHEITEPSRERVSPLTEASALAMHIGASIGVTPRFATAHLTTHNRAHQGLYKRFTDLDAEQLFVDYNTKGILAY KRAADALLKIQPLGIDHPIAYDLLLVAKRALRDVIESNRVLFQRLDADDFFYCVRPYYKPYRVGSQIYRGANAGDFAGIN VIDMLLGLCSANEPGYSQMLVDKFLYMMPEDQAILRDCMRRTSFMDELLNLSHFSAEPWYQQNVKLFLEVCALHGETAIQ HHNELVAKYIAQPSKTMEQQHMSKVTASGPPLDVLLNSLEKLRDRRAAAKRSDIRTRYEDIQSLLASMEA >Mature_389_residues TGNTQAFDHWIRTRFVELNSKLESLYAQQADRANVEGVGEDLKFQLESEGRELIACLLAEGNTDEGFDHAFDLLGNVGLY MAACRRHEITEPSRERVSPLTEASALAMHIGASIGVTPRFATAHLTTHNRAHQGLYKRFTDLDAEQLFVDYNTKGILAYK RAADALLKIQPLGIDHPIAYDLLLVAKRALRDVIESNRVLFQRLDADDFFYCVRPYYKPYRVGSQIYRGANAGDFAGINV IDMLLGLCSANEPGYSQMLVDKFLYMMPEDQAILRDCMRRTSFMDELLNLSHFSAEPWYQQNVKLFLEVCALHGETAIQH HNELVAKYIAQPSKTMEQQHMSKVTASGPPLDVLLNSLEKLRDRRAAAKRSDIRTRYEDIQSLLASMEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44157; Mature: 44026
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGNTQAFDHWIRTRFVELNSKLESLYAQQADRANVEGVGEDLKFQLESEGRELIACLLA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCCHHHHHHHHH EGNTDEGFDHAFDLLGNVGLYMAACRRHEITEPSRERVSPLTEASALAMHIGASIGVTPR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCC FATAHLTTHNRAHQGLYKRFTDLDAEQLFVDYNTKGILAYKRAADALLKIQPLGIDHPIA HHEEEEHHCHHHHHHHHHHHHCCCHHHEEEEECCCCEEHHHHHHHHHHEEECCCCCCHHH YDLLLVAKRALRDVIESNRVLFQRLDADDFFYCVRPYYKPYRVGSQIYRGANAGDFAGIN HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCHH VIDMLLGLCSANEPGYSQMLVDKFLYMMPEDQAILRDCMRRTSFMDELLNLSHFSAEPWY HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QQNVKLFLEVCALHGETAIQHHNELVAKYIAQPSKTMEQQHMSKVTASGPPLDVLLNSLE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHH KLRDRRAAAKRSDIRTRYEDIQSLLASMEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TGNTQAFDHWIRTRFVELNSKLESLYAQQADRANVEGVGEDLKFQLESEGRELIACLLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEHHCCHHHHHHHHH EGNTDEGFDHAFDLLGNVGLYMAACRRHEITEPSRERVSPLTEASALAMHIGASIGVTPR CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCHHHHHHHHHHHHCCCCCCCCC FATAHLTTHNRAHQGLYKRFTDLDAEQLFVDYNTKGILAYKRAADALLKIQPLGIDHPIA HHEEEEHHCHHHHHHHHHHHHCCCHHHEEEEECCCCEEHHHHHHHHHHEEECCCCCCHHH YDLLLVAKRALRDVIESNRVLFQRLDADDFFYCVRPYYKPYRVGSQIYRGANAGDFAGIN HHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCHH VIDMLLGLCSANEPGYSQMLVDKFLYMMPEDQAILRDCMRRTSFMDELLNLSHFSAEPWY HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHH QQNVKLFLEVCALHGETAIQHHNELVAKYIAQPSKTMEQQHMSKVTASGPPLDVLLNSLE HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHH KLRDRRAAAKRSDIRTRYEDIQSLLASMEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA