| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963687
Identifier: 157963687
GI number: 157963687
Start: 4721695
End: 4722822
Strand: Reverse
Name: 157963687
Synonym: Spea_3876
Alternate gene names: NA
Gene position: 4722822-4721695 (Counterclockwise)
Preceding gene: 157963716
Following gene: 157963686
Centisome position: 91.27
GC content: 47.52
Gene sequence:
>1128_bases ATGCAGTTTAAGTCATTCTTGTGTGTTAATGGTATCGATAATGGACAGCGTTTTTCTGTCATTAGTGGATTGATTTATTT CATCTTATTGTTAGCCGTGGTGCTATTTAGCCCTTCGGCTCCCCTGTATCTTGTTGCCATTTTACTCACGCCTATATTGG CTTTGACCAGTCTGCGTCGCCTACGTGACAGTGAAAAGTCACCAAAGTTAATGTTATTAACAATGGTGCCATTTTGGTTG GTGCTAATAACCTTAGTGCATATTCACAGCATGATGCTGTTGTTGACGTTATTGGTCGTTGCAGGCCTAGCGATTGGTTA TTTAGCCTTGTTACCTGGGGAATCTGGCGCCAATTATGTGCAGGGCTATTCTGGTCCCGTCGATATGAGTTCGAGCAAAG TAACGATTGATAAGACAAGTCAGCGGGTCAGAGTCGAGCCGACCTTAGGTGGCGATGAGAATGTGACGACCAGTTTTGCG ACAAATAGCGGCACCGAATTTATGCAGGCCGAGGAGCAGGAGCTCGCTCAAAATGATCATGCTTCTGGCAGGGATGATCA GCCTTTGCGCAAAAGGGCTAAACCGGCAGCATTTAATATGGCTCAGCTGCAGCAGGCACTGCAGATTAATCAGAAGTGGT TATTTGGCATCGCGGGTGTGTTAGTCAGTGTCATGCTTATTGCTAGTATCTGGTCACTTATTCCTAGCTCTGAGCCCGAA GTCGAAACCGCGGCATTGCCTGAAAACAGTATAGATACTACTGCTCAGGCCGAGCGGATCTCGACATCGATGCCAGATGG CTTTAGCTTAGTGCTTGAAGATGATCTATTGATCATGCGCTGGCTCGGTGAAAGCGGTTCACCAAGCAAACTATGGTCTT TGGCTACGGCAAAAGGCGATAAAACTTGCTCACGACTGCGCTTTAATGACGGCACCGAATATCGTCCGCTTGTGGTTGAA CTACTTGCAGATACGGGCACCGAAGCTCGATTTTCCCCTCTGGATACCGAAGCGATTATTGTCGACATGGCAAGAGGCGG TAACGTCAGCCTTTGCGGCTATAACTTCAGTCTGAAGGGCAGCCAAGCCGCACTGGGTAAGGTAGCCGCTTTTCGCACTT ATTTATAA
Upstream 100 bases:
>100_bases TGCTTTTATGCTTTCGCCTGGGCATAAAATTTGGGTGTGCTGTGACTGCTTAGATAGGGTGCACTGCCGAATCGTGGATC ATTGTTAAGGTCGTAAATAT
Downstream 100 bases:
>100_bases GCTTAGTGCAGAGCTTGCCTGCGTCGATTAGCGCTGGATATTAGTCTGTAGACTCATTAAACTGCTTCGCCTTGTCGTGG TGGGCACTTTAATCACTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MQFKSFLCVNGIDNGQRFSVISGLIYFILLLAVVLFSPSAPLYLVAILLTPILALTSLRRLRDSEKSPKLMLLTMVPFWL VLITLVHIHSMMLLLTLLVVAGLAIGYLALLPGESGANYVQGYSGPVDMSSSKVTIDKTSQRVRVEPTLGGDENVTTSFA TNSGTEFMQAEEQELAQNDHASGRDDQPLRKRAKPAAFNMAQLQQALQINQKWLFGIAGVLVSVMLIASIWSLIPSSEPE VETAALPENSIDTTAQAERISTSMPDGFSLVLEDDLLIMRWLGESGSPSKLWSLATAKGDKTCSRLRFNDGTEYRPLVVE LLADTGTEARFSPLDTEAIIVDMARGGNVSLCGYNFSLKGSQAALGKVAAFRTYL
Sequences:
>Translated_375_residues MQFKSFLCVNGIDNGQRFSVISGLIYFILLLAVVLFSPSAPLYLVAILLTPILALTSLRRLRDSEKSPKLMLLTMVPFWL VLITLVHIHSMMLLLTLLVVAGLAIGYLALLPGESGANYVQGYSGPVDMSSSKVTIDKTSQRVRVEPTLGGDENVTTSFA TNSGTEFMQAEEQELAQNDHASGRDDQPLRKRAKPAAFNMAQLQQALQINQKWLFGIAGVLVSVMLIASIWSLIPSSEPE VETAALPENSIDTTAQAERISTSMPDGFSLVLEDDLLIMRWLGESGSPSKLWSLATAKGDKTCSRLRFNDGTEYRPLVVE LLADTGTEARFSPLDTEAIIVDMARGGNVSLCGYNFSLKGSQAALGKVAAFRTYL >Mature_375_residues MQFKSFLCVNGIDNGQRFSVISGLIYFILLLAVVLFSPSAPLYLVAILLTPILALTSLRRLRDSEKSPKLMLLTMVPFWL VLITLVHIHSMMLLLTLLVVAGLAIGYLALLPGESGANYVQGYSGPVDMSSSKVTIDKTSQRVRVEPTLGGDENVTTSFA TNSGTEFMQAEEQELAQNDHASGRDDQPLRKRAKPAAFNMAQLQQALQINQKWLFGIAGVLVSVMLIASIWSLIPSSEPE VETAALPENSIDTTAQAERISTSMPDGFSLVLEDDLLIMRWLGESGSPSKLWSLATAKGDKTCSRLRFNDGTEYRPLVVE LLADTGTEARFSPLDTEAIIVDMARGGNVSLCGYNFSLKGSQAALGKVAAFRTYL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40785; Mature: 40785
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFKSFLCVNGIDNGQRFSVISGLIYFILLLAVVLFSPSAPLYLVAILLTPILALTSLRR CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LRDSEKSPKLMLLTMVPFWLVLITLVHIHSMMLLLTLLVVAGLAIGYLALLPGESGANYV HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QGYSGPVDMSSSKVTIDKTSQRVRVEPTLGGDENVTTSFATNSGTEFMQAEEQELAQNDH CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCC ASGRDDQPLRKRAKPAAFNMAQLQQALQINQKWLFGIAGVLVSVMLIASIWSLIPSSEPE CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VETAALPENSIDTTAQAERISTSMPDGFSLVLEDDLLIMRWLGESGSPSKLWSLATAKGD CCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHCCCC KTCSRLRFNDGTEYRPLVVELLADTGTEARFSPLDTEAIIVDMARGGNVSLCGYNFSLKG HHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEECCC SQAALGKVAAFRTYL CHHHHHHHHHHHHCC >Mature Secondary Structure MQFKSFLCVNGIDNGQRFSVISGLIYFILLLAVVLFSPSAPLYLVAILLTPILALTSLRR CCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH LRDSEKSPKLMLLTMVPFWLVLITLVHIHSMMLLLTLLVVAGLAIGYLALLPGESGANYV HHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH QGYSGPVDMSSSKVTIDKTSQRVRVEPTLGGDENVTTSFATNSGTEFMQAEEQELAQNDH CCCCCCCCCCCCEEEEECCCCEEEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCC ASGRDDQPLRKRAKPAAFNMAQLQQALQINQKWLFGIAGVLVSVMLIASIWSLIPSSEPE CCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC VETAALPENSIDTTAQAERISTSMPDGFSLVLEDDLLIMRWLGESGSPSKLWSLATAKGD CCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCEEECCCCCCCHHHHHHHHHCCCC KTCSRLRFNDGTEYRPLVVELLADTGTEARFSPLDTEAIIVDMARGGNVSLCGYNFSLKG HHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCCEEEEECCEECCC SQAALGKVAAFRTYL CHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA