| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963686
Identifier: 157963686
GI number: 157963686
Start: 4720662
End: 4721567
Strand: Reverse
Name: 157963686
Synonym: Spea_3875
Alternate gene names: NA
Gene position: 4721567-4720662 (Counterclockwise)
Preceding gene: 157963687
Following gene: 157963685
Centisome position: 91.25
GC content: 50.22
Gene sequence:
>906_bases ATGAGTAACAACAAGCAGGATTTAACCTTAGTGATCCTAGCCGCGGGTTTAGGTAGCCGATTTGGCGGCGATAAACAGTT GGCGCAGCTTGGGCCTAATGGTGAAACCATGTTGGAGCTATCGTTAAAGAGTGCCTATAACGCTGGCTTCAGTCGCGCAG TGCTGGTGATCCGTCCCGAGTTGACTGACATGCTAGACGAGGCGCTTGCTGGAAAGCTAGCCGATGACTTTAGCTGCGAG TATTGCATTCAATCACTGGATGATTTACCGAATTCAGCCCGTGGATTTGTCGATGTCGCCCAGCGCCAGAAACCTTGGGG CACAGCGCATGCTCTTTGGAGTGCGAGAAATCACGTTCACGGCCCCATGGCCGTGATCAATGCCGACGATTTTTATGGTG ACAGCGCCTTTAGTTTACTCGCAGAAGGATTATCCGCAGCAGATAATGACTGGATGATGGTCGCCTATCCAATCGGTCTA ACCCTGTCTGAAAATGGCGGCGTCAACCGAGGTTTATGTCAGGTTGAGGCGGGCAAGCTGGTCGATGTCGCCGAATGGCT TGATATTCGCTGTGAAGCATCGGGGTTAACTGGTACGTTAGATGAGCAGCGTCTAGCTATTGCCGATGATGCCGTGGTTT CGATGACTTGCTGGGGCTTTAAGCCCGATATTTTCGAGGTGATTGAGCAGCAGTTTAGTCATTTCCTTAAGGATAATGGT CAGCATCCGAAAGCCGAGTGTTACTTGCCAACTGTGGTGCAAGCTAGACTCGATGCTCGCTCAGAGACTCAAACTGACAA GGTGGTTAATGTCAGCGTTGCTAAGGAGTCCTGGTACGGCGTGACCTACCCAGAAGATGTGAATTGGGTAAGAGAAAAAT TGCAGCAAACCCTTAGCAAAGATTAA
Upstream 100 bases:
>100_bases TTAGCGCTGGATATTAGTCTGTAGACTCATTAAACTGCTTCGCCTTGTCGTGGTGGGCACTTTAATCACTTGAGAGAGTG TCATTGTTTGAGAGAGAGTC
Downstream 100 bases:
>100_bases TAGCGGTAAGCTAATTTCATATTTAACAATGAGCTGCAAGGAAGGTCTGGAGAAACAAGCCCAGATAGCAGAGATACAGA GATAACTGGAGTGTTGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSNNKQDLTLVILAAGLGSRFGGDKQLAQLGPNGETMLELSLKSAYNAGFSRAVLVIRPELTDMLDEALAGKLADDFSCE YCIQSLDDLPNSARGFVDVAQRQKPWGTAHALWSARNHVHGPMAVINADDFYGDSAFSLLAEGLSAADNDWMMVAYPIGL TLSENGGVNRGLCQVEAGKLVDVAEWLDIRCEASGLTGTLDEQRLAIADDAVVSMTCWGFKPDIFEVIEQQFSHFLKDNG QHPKAECYLPTVVQARLDARSETQTDKVVNVSVAKESWYGVTYPEDVNWVREKLQQTLSKD
Sequences:
>Translated_301_residues MSNNKQDLTLVILAAGLGSRFGGDKQLAQLGPNGETMLELSLKSAYNAGFSRAVLVIRPELTDMLDEALAGKLADDFSCE YCIQSLDDLPNSARGFVDVAQRQKPWGTAHALWSARNHVHGPMAVINADDFYGDSAFSLLAEGLSAADNDWMMVAYPIGL TLSENGGVNRGLCQVEAGKLVDVAEWLDIRCEASGLTGTLDEQRLAIADDAVVSMTCWGFKPDIFEVIEQQFSHFLKDNG QHPKAECYLPTVVQARLDARSETQTDKVVNVSVAKESWYGVTYPEDVNWVREKLQQTLSKD >Mature_300_residues SNNKQDLTLVILAAGLGSRFGGDKQLAQLGPNGETMLELSLKSAYNAGFSRAVLVIRPELTDMLDEALAGKLADDFSCEY CIQSLDDLPNSARGFVDVAQRQKPWGTAHALWSARNHVHGPMAVINADDFYGDSAFSLLAEGLSAADNDWMMVAYPIGLT LSENGGVNRGLCQVEAGKLVDVAEWLDIRCEASGLTGTLDEQRLAIADDAVVSMTCWGFKPDIFEVIEQQFSHFLKDNGQ HPKAECYLPTVVQARLDARSETQTDKVVNVSVAKESWYGVTYPEDVNWVREKLQQTLSKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32980; Mature: 32849
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNNKQDLTLVILAAGLGSRFGGDKQLAQLGPNGETMLELSLKSAYNAGFSRAVLVIRPE CCCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEHHHHHCCCCCEEEEEECCH LTDMLDEALAGKLADDFSCEYCIQSLDDLPNSARGFVDVAQRQKPWGTAHALWSARNHVH HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCC GPMAVINADDFYGDSAFSLLAEGLSAADNDWMMVAYPIGLTLSENGGVNRGLCQVEAGKL CCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCEEEECCCCE VDVAEWLDIRCEASGLTGTLDEQRLAIADDAVVSMTCWGFKPDIFEVIEQQFSHFLKDNG EEHHHHHCEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC QHPKAECYLPTVVQARLDARSETQTDKVVNVSVAKESWYGVTYPEDVNWVREKLQQTLSK CCCCCEEECHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC D C >Mature Secondary Structure SNNKQDLTLVILAAGLGSRFGGDKQLAQLGPNGETMLELSLKSAYNAGFSRAVLVIRPE CCCCCCEEEEEEEECCCCCCCCCHHHHHCCCCCCEEEEEEHHHHHCCCCCEEEEEECCH LTDMLDEALAGKLADDFSCEYCIQSLDDLPNSARGFVDVAQRQKPWGTAHALWSARNHVH HHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCC GPMAVINADDFYGDSAFSLLAEGLSAADNDWMMVAYPIGLTLSENGGVNRGLCQVEAGKL CCEEEEECCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCCEEEECCCCE VDVAEWLDIRCEASGLTGTLDEQRLAIADDAVVSMTCWGFKPDIFEVIEQQFSHFLKDNG EEHHHHHCEEEECCCCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC QHPKAECYLPTVVQARLDARSETQTDKVVNVSVAKESWYGVTYPEDVNWVREKLQQTLSK CCCCCEEECHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCC D C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA