| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963640
Identifier: 157963640
GI number: 157963640
Start: 4655617
End: 4657407
Strand: Direct
Name: 157963640
Synonym: Spea_3829
Alternate gene names: NA
Gene position: 4655617-4657407 (Clockwise)
Preceding gene: 157963632
Following gene: 157963642
Centisome position: 89.97
GC content: 43.33
Gene sequence:
>1791_bases ATGGATTTGCGCATTATCATCCTCAGTTTTATGCTGTGGCTCTCGCCTGCGTATTCATTAACCTTAGAACAGCTTGAGCA ACTCAATACCTTAGTCTTTCAATATCCTAGTAAAGCCCTCAATAATATTCATGGCATTGAACAAAACCTCCAGTCCTACT TAGATCCCAAGGTACTGCAACTACGCATGAGCGCCTTTAAGTGCGAAACCTATCTTCAGCTAGGTGAAAATGCCGCGGCT ATAAACCTAGCTAGACTCAATGAAGCAAGAGCCAAGCAGTTGAAGTTAGATGAAGCTAGACCTTACTTTCTTAATTGTAT GGCTCAGGCCTATGTTAATTACGGAAATTACCAGCAGGCGTTACCCTTACTTCACTCATCTATCGCCATGTCTCGTCGTT TAGAGCAGCCTCAGGCCCTGATTAATGGCCTATGGCTCAGAAGCCAACTAGACGCAAAGGTTCAGCATAACGACACCGCC ATCGAAGACTTACGTCTAGCGCTAGACCTTTATCCGCAAGTTAAGCGCCATGATGCACAGTGGCTGCTAACTCCTATTGC ATACTTAAATGCTTCTATGGCTAAGTTGTTGATGGACGTGAATGAGCCTAAAGAAGCTAAACTTTTTTTAGATAAGGCAC TCAGAGATAAGGATTCTGCAGGAAAAATTGCGCTTAATTTATCAATTGCGGCCGCAAACTTAGCGCAATCAAATCGTCAA GCTAAGTTAAGAGATCACTATACTCAAATAGCAAGAAGTAACCTTGCCGAGCTTGGCAGCCCCTTTGAATTAGCCGTTGC TTACAAGCAAATAGCCTTTATTGATTTTAGTAGTGGAAAATACAGTAGCGCAGAGCAACTGCTTCATTTAAGCATTAATA CCTTTAAGAAAGAGTCAAACGCTAGCGCAACCATTAGTGCCCTACATCTACTAGCACAAGTCGAGTTAGCTCAAGGTAAA GAGAAGCTAGGCCTAGAACTGATGAATGAAGCCGTAGCGACTGCCAAACAGAAAAAGCGCTATACGGATCTTAAGCTTTG CTATGCCGTGCTAGCCGATTACTTTGCCAAAAAGCAAGACTACGCCTTAGCCTATGATTACCAACTCAAGCAATTTAAGG CCTCTGAGAAAGAAAGCCTATTTATTCAGAAGATCTGGCTATCTCATTTAAAATCTGACTTAAGCCGTCAACAACAGGTC TCCAACAGACAGCAAAGTACCAGTGTTGCAGCCCTACCTAGCCAGCTTATCCCCAGGGAACTCTTACCAATACTGTTTAT TCTGCTCAGCTTAATTATCTTTATCGCCTGGTATTACAGACAACCATCCAAATCTTCACTGGAAATTAAAGAGCCTATGC CGGTAAGGCCTAATGCGACGGGCAAGCAAAAACTAGAAGATATGCTTAGCGTAAGTAAGCACGCGAATTACCCTCTGTCA TTATTAGTGCTCGATCCGAGCGGAGTATTGAGTAGTGAGATCCCGTTGATGATTGCACAACTCAAGACGAAGTTGAGGGT TCAAGATCTGTTGTTCCTGCAGGAAAAACAACAATTGTTAATCATGCTACCTCATACGTCTGAGGCTGCAGCGCTCAATG TCATCGAGCAGTTATCGGATACGGTGGCAGAGTGGCAAAACGACAGTAAGGTCAATATTGGCCTTGCCAGCATGCAGCAG TTTGATAATTTACAATCTATGATAAAGCGCGCCAACATCAGTCAGCTGAGAAGATTAAAGCCTGTTAGCCAAAATCGGCA GTATCAGCCATCAAGAAAGTCAGGATCTTAA
Upstream 100 bases:
>100_bases TCTCGCAACAAGCTTTTTATGCACATTTTATTTAGATTCGTTATAATGCGGCCCAAGTTGAAAGAAAGCGGATAAGGATT CCCCACTGAAGCGTTCAAAA
Downstream 100 bases:
>100_bases AGGGCCAATTATACAGCTAAGCCGTTTATCTATAACAAGCATTCTCTGGACTCGCCTTCTTTGCATTAACCTTCCGCTAG ATAATCGGCGATCTCATCGA
Product: response regulator receiver protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide Domain-Containing Protein
Number of amino acids: Translated: 596; Mature: 596
Protein sequence:
>596_residues MDLRIIILSFMLWLSPAYSLTLEQLEQLNTLVFQYPSKALNNIHGIEQNLQSYLDPKVLQLRMSAFKCETYLQLGENAAA INLARLNEARAKQLKLDEARPYFLNCMAQAYVNYGNYQQALPLLHSSIAMSRRLEQPQALINGLWLRSQLDAKVQHNDTA IEDLRLALDLYPQVKRHDAQWLLTPIAYLNASMAKLLMDVNEPKEAKLFLDKALRDKDSAGKIALNLSIAAANLAQSNRQ AKLRDHYTQIARSNLAELGSPFELAVAYKQIAFIDFSSGKYSSAEQLLHLSINTFKKESNASATISALHLLAQVELAQGK EKLGLELMNEAVATAKQKKRYTDLKLCYAVLADYFAKKQDYALAYDYQLKQFKASEKESLFIQKIWLSHLKSDLSRQQQV SNRQQSTSVAALPSQLIPRELLPILFILLSLIIFIAWYYRQPSKSSLEIKEPMPVRPNATGKQKLEDMLSVSKHANYPLS LLVLDPSGVLSSEIPLMIAQLKTKLRVQDLLFLQEKQQLLIMLPHTSEAAALNVIEQLSDTVAEWQNDSKVNIGLASMQQ FDNLQSMIKRANISQLRRLKPVSQNRQYQPSRKSGS
Sequences:
>Translated_596_residues MDLRIIILSFMLWLSPAYSLTLEQLEQLNTLVFQYPSKALNNIHGIEQNLQSYLDPKVLQLRMSAFKCETYLQLGENAAA INLARLNEARAKQLKLDEARPYFLNCMAQAYVNYGNYQQALPLLHSSIAMSRRLEQPQALINGLWLRSQLDAKVQHNDTA IEDLRLALDLYPQVKRHDAQWLLTPIAYLNASMAKLLMDVNEPKEAKLFLDKALRDKDSAGKIALNLSIAAANLAQSNRQ AKLRDHYTQIARSNLAELGSPFELAVAYKQIAFIDFSSGKYSSAEQLLHLSINTFKKESNASATISALHLLAQVELAQGK EKLGLELMNEAVATAKQKKRYTDLKLCYAVLADYFAKKQDYALAYDYQLKQFKASEKESLFIQKIWLSHLKSDLSRQQQV SNRQQSTSVAALPSQLIPRELLPILFILLSLIIFIAWYYRQPSKSSLEIKEPMPVRPNATGKQKLEDMLSVSKHANYPLS LLVLDPSGVLSSEIPLMIAQLKTKLRVQDLLFLQEKQQLLIMLPHTSEAAALNVIEQLSDTVAEWQNDSKVNIGLASMQQ FDNLQSMIKRANISQLRRLKPVSQNRQYQPSRKSGS >Mature_596_residues MDLRIIILSFMLWLSPAYSLTLEQLEQLNTLVFQYPSKALNNIHGIEQNLQSYLDPKVLQLRMSAFKCETYLQLGENAAA INLARLNEARAKQLKLDEARPYFLNCMAQAYVNYGNYQQALPLLHSSIAMSRRLEQPQALINGLWLRSQLDAKVQHNDTA IEDLRLALDLYPQVKRHDAQWLLTPIAYLNASMAKLLMDVNEPKEAKLFLDKALRDKDSAGKIALNLSIAAANLAQSNRQ AKLRDHYTQIARSNLAELGSPFELAVAYKQIAFIDFSSGKYSSAEQLLHLSINTFKKESNASATISALHLLAQVELAQGK EKLGLELMNEAVATAKQKKRYTDLKLCYAVLADYFAKKQDYALAYDYQLKQFKASEKESLFIQKIWLSHLKSDLSRQQQV SNRQQSTSVAALPSQLIPRELLPILFILLSLIIFIAWYYRQPSKSSLEIKEPMPVRPNATGKQKLEDMLSVSKHANYPLS LLVLDPSGVLSSEIPLMIAQLKTKLRVQDLLFLQEKQQLLIMLPHTSEAAALNVIEQLSDTVAEWQNDSKVNIGLASMQQ FDNLQSMIKRANISQLRRLKPVSQNRQYQPSRKSGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67533; Mature: 67533
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDLRIIILSFMLWLSPAYSLTLEQLEQLNTLVFQYPSKALNNIHGIEQNLQSYLDPKVLQ CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH LRMSAFKCETYLQLGENAAAINLARLNEARAKQLKLDEARPYFLNCMAQAYVNYGNYQQA HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH LPLLHSSIAMSRRLEQPQALINGLWLRSQLDAKVQHNDTAIEDLRLALDLYPQVKRHDAQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCHH WLLTPIAYLNASMAKLLMDVNEPKEAKLFLDKALRDKDSAGKIALNLSIAAANLAQSNRQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHCCCC AKLRDHYTQIARSNLAELGSPFELAVAYKQIAFIDFSSGKYSSAEQLLHLSINTFKKESN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCC ASATISALHLLAQVELAQGKEKLGLELMNEAVATAKQKKRYTDLKLCYAVLADYFAKKQD CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YALAYDYQLKQFKASEKESLFIQKIWLSHLKSDLSRQQQVSNRQQSTSVAALPSQLIPRE CEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LLPILFILLSLIIFIAWYYRQPSKSSLEIKEPMPVRPNATGKQKLEDMLSVSKHANYPLS HHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE LLVLDPSGVLSSEIPLMIAQLKTKLRVQDLLFLQEKQQLLIMLPHTSEAAALNVIEQLSD EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH TVAEWQNDSKVNIGLASMQQFDNLQSMIKRANISQLRRLKPVSQNRQYQPSRKSGS HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDLRIIILSFMLWLSPAYSLTLEQLEQLNTLVFQYPSKALNNIHGIEQNLQSYLDPKVLQ CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHH LRMSAFKCETYLQLGENAAAINLARLNEARAKQLKLDEARPYFLNCMAQAYVNYGNYQQA HHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHH LPLLHSSIAMSRRLEQPQALINGLWLRSQLDAKVQHNDTAIEDLRLALDLYPQVKRHDAQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHCCCCHHHHHHHHHHHHHHHHHHCCHH WLLTPIAYLNASMAKLLMDVNEPKEAKLFLDKALRDKDSAGKIALNLSIAAANLAQSNRQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHCCCC AKLRDHYTQIARSNLAELGSPFELAVAYKQIAFIDFSSGKYSSAEQLLHLSINTFKKESN HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHHHCCCC ASATISALHLLAQVELAQGKEKLGLELMNEAVATAKQKKRYTDLKLCYAVLADYFAKKQD CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC YALAYDYQLKQFKASEKESLFIQKIWLSHLKSDLSRQQQVSNRQQSTSVAALPSQLIPRE CEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH LLPILFILLSLIIFIAWYYRQPSKSSLEIKEPMPVRPNATGKQKLEDMLSVSKHANYPLS HHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE LLVLDPSGVLSSEIPLMIAQLKTKLRVQDLLFLQEKQQLLIMLPHTSEAAALNVIEQLSD EEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHH TVAEWQNDSKVNIGLASMQQFDNLQSMIKRANISQLRRLKPVSQNRQYQPSRKSGS HHHHHCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA