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The map label for this gene is tsgA [H]

Identifier: 157963597

GI number: 157963597

Start: 4600689

End: 4601861

Strand: Direct

Name: tsgA [H]

Synonym: Spea_3785

Alternate gene names: 157963597

Gene position: 4600689-4601861 (Clockwise)

Preceding gene: 157963596

Following gene: 157963602

Centisome position: 88.91

GC content: 47.23

Gene sequence:

>1173_bases
ATGATGAAAAACAAAATCTCCTTAACCTTGCTCAGCTTTCTCGCCAACTTCGTGATGGCGGGTTTTGCGACGCAGTTCGG
TATGCTCATTGAACCTATTAGCGATAAGTTCTCAGCCAACGTCAATGAAGTTGCCTCAATATTCTCTCTACTTAATGGCG
GCGCCCTAGCAGGTACCATTGCAGCCTTCTTCTTAATTGAAAGAATTGGTGTAAAACGCATTACCCTGCTTAGCTACGTC
AGCATTGCATTGAGCGCAGCGGCGCTACACTTCACTGGCTCTCTGAGCGTAGTCATGGTGGCAATGACTGTGATTGGCTT
GTGTGGCGGCGTAGGCCTTTGTATCGCGGGTACCATTGTGGTTTCGGTGTGGAAGGACAAGATCCAAAGCACTATGTTAG
TGGTACAAGATGCCACCTTTAACGTCGCTGGCGTAGTATTCCCATTGATCACCACGTATGCACTAAGCAATGCACTATCT
TGGAGTTACAGCTATCTAGCAGTGGGGGTTGTAGCCCTAGCCACAGCGGCTATCGCACTGGCAACTAACTTCGAACTTTG
TGAATCCAAAGGCGATAGTGAGCAGAGCAAAGACGAATCTGAGTGGAACCTTGGCATCATCAGCGGCGGTTTAGGCTTAT
TCCTCGGTATGCTAGCGCTTTACACCTTCCTCACCTGGGCACCTATGTTCGTTAAGACTAAGTTCGACATCCCATTTGAA
GAAGCGGGTAATATCATTACACAATACTGGTCTGCCGCACTCGTGGGCGCACTTGTCTCTACAGTGATAGTGACTCGAGT
TAAGATCCAGTACTTCCTGATGGGTATTATTTCACTAGCGTTTGTTATCACCAGCCTTATCGTCACCACTGAAAACTTAA
GCTGGATTGGCTACTTAACCTATGGCTACGGCTTTGCCTGTGCGGCGCTGTATAACGCGTTTATCGCTTACGGCGTATCG
TTTGTGAAAAATGCCAGCAGCCGTAATGTGTCTTATATCTTGATTAGTGGTAGTGCAGGCGCCATGTTTAGCCCTGCAAT
CAGCTCACTATTTGAAAGTATCATTGGCCTACAAACGGTGATGTATGCAATCCCTGTGATCTACGGATTAATCATTGCAA
TGTTGGTGCTATCTAACCGCCAAAAAGTGACGTTAACTCAGCAGGCAGCGTAA

Upstream 100 bases:

>100_bases
GTAAATCTGAATAAGCCGCTCGAAGCCTAGCTTCCAGCGGCTTACTTTTTATTTGCTAGTTTTTTGTAATTAGCTTTTGA
TACAGCAAAATTAGGAACAG

Downstream 100 bases:

>100_bases
GCAACTAAAGCTCGGCCGATAGCTCCAAGCCTAAACATGGGTTTGGAGCTACTCTATAAAGGCTTTTAATCCCTCTAAAT
CGCAGGTAATCAGTCCCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MMKNKISLTLLSFLANFVMAGFATQFGMLIEPISDKFSANVNEVASIFSLLNGGALAGTIAAFFLIERIGVKRITLLSYV
SIALSAAALHFTGSLSVVMVAMTVIGLCGGVGLCIAGTIVVSVWKDKIQSTMLVVQDATFNVAGVVFPLITTYALSNALS
WSYSYLAVGVVALATAAIALATNFELCESKGDSEQSKDESEWNLGIISGGLGLFLGMLALYTFLTWAPMFVKTKFDIPFE
EAGNIITQYWSAALVGALVSTVIVTRVKIQYFLMGIISLAFVITSLIVTTENLSWIGYLTYGYGFACAALYNAFIAYGVS
FVKNASSRNVSYILISGSAGAMFSPAISSLFESIIGLQTVMYAIPVIYGLIIAMLVLSNRQKVTLTQQAA

Sequences:

>Translated_390_residues
MMKNKISLTLLSFLANFVMAGFATQFGMLIEPISDKFSANVNEVASIFSLLNGGALAGTIAAFFLIERIGVKRITLLSYV
SIALSAAALHFTGSLSVVMVAMTVIGLCGGVGLCIAGTIVVSVWKDKIQSTMLVVQDATFNVAGVVFPLITTYALSNALS
WSYSYLAVGVVALATAAIALATNFELCESKGDSEQSKDESEWNLGIISGGLGLFLGMLALYTFLTWAPMFVKTKFDIPFE
EAGNIITQYWSAALVGALVSTVIVTRVKIQYFLMGIISLAFVITSLIVTTENLSWIGYLTYGYGFACAALYNAFIAYGVS
FVKNASSRNVSYILISGSAGAMFSPAISSLFESIIGLQTVMYAIPVIYGLIIAMLVLSNRQKVTLTQQAA
>Mature_390_residues
MMKNKISLTLLSFLANFVMAGFATQFGMLIEPISDKFSANVNEVASIFSLLNGGALAGTIAAFFLIERIGVKRITLLSYV
SIALSAAALHFTGSLSVVMVAMTVIGLCGGVGLCIAGTIVVSVWKDKIQSTMLVVQDATFNVAGVVFPLITTYALSNALS
WSYSYLAVGVVALATAAIALATNFELCESKGDSEQSKDESEWNLGIISGGLGLFLGMLALYTFLTWAPMFVKTKFDIPFE
EAGNIITQYWSAALVGALVSTVIVTRVKIQYFLMGIISLAFVITSLIVTTENLSWIGYLTYGYGFACAALYNAFIAYGVS
FVKNASSRNVSYILISGSAGAMFSPAISSLFESIIGLQTVMYAIPVIYGLIIAMLVLSNRQKVTLTQQAA

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TsgA family [H]

Homologues:

Organism=Escherichia coli, GI1789764, Length=392, Percent_Identity=23.2142857142857, Blast_Score=127, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41570; Mature: 41570

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKNKISLTLLSFLANFVMAGFATQFGMLIEPISDKFSANVNEVASIFSLLNGGALAGTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH
AAFFLIERIGVKRITLLSYVSIALSAAALHFTGSLSVVMVAMTVIGLCGGVGLCIAGTIV
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
VSVWKDKIQSTMLVVQDATFNVAGVVFPLITTYALSNALSWSYSYLAVGVVALATAAIAL
HHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATNFELCESKGDSEQSKDESEWNLGIISGGLGLFLGMLALYTFLTWAPMFVKTKFDIPFE
HCCHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHEEEECCCCHH
EAGNIITQYWSAALVGALVSTVIVTRVKIQYFLMGIISLAFVITSLIVTTENLSWIGYLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHH
YGYGFACAALYNAFIAYGVSFVKNASSRNVSYILISGSAGAMFSPAISSLFESIIGLQTV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
MYAIPVIYGLIIAMLVLSNRQKVTLTQQAA
HHHHHHHHHHHHHHHHHCCCCEEEEECCCC
>Mature Secondary Structure
MMKNKISLTLLSFLANFVMAGFATQFGMLIEPISDKFSANVNEVASIFSLLNGGALAGTI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHH
AAFFLIERIGVKRITLLSYVSIALSAAALHFTGSLSVVMVAMTVIGLCGGVGLCIAGTIV
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHH
VSVWKDKIQSTMLVVQDATFNVAGVVFPLITTYALSNALSWSYSYLAVGVVALATAAIAL
HHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATNFELCESKGDSEQSKDESEWNLGIISGGLGLFLGMLALYTFLTWAPMFVKTKFDIPFE
HCCHHHHHCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHEEEECCCCHH
EAGNIITQYWSAALVGALVSTVIVTRVKIQYFLMGIISLAFVITSLIVTTENLSWIGYLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHH
YGYGFACAALYNAFIAYGVSFVKNASSRNVSYILISGSAGAMFSPAISSLFESIIGLQTV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHH
MYAIPVIYGLIIAMLVLSNRQKVTLTQQAA
HHHHHHHHHHHHHHHHHCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA