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The map label for this gene is deoD3 [H]

Identifier: 157963596

GI number: 157963596

Start: 4599888

End: 4600592

Strand: Direct

Name: deoD3 [H]

Synonym: Spea_3784

Alternate gene names: 157963596

Gene position: 4599888-4600592 (Clockwise)

Preceding gene: 157963595

Following gene: 157963597

Centisome position: 88.89

GC content: 48.65

Gene sequence:

>705_bases
ATGACTGCACATATCAGTGGCAAAGCAGGCGATTTTGCTGAAACTATCATCATGCCGGGCGACCCGCTTCGCGCAAAATA
CATCGCAGAAAACTTCCTAGAAGATGCGGTGGAAGTCACCAACATTCGCAATATGCTAGGTTACACAGGCTTCTATAAAG
GCCAGCGCATCTCGGTCATGGGCCACGGCATGGGTATCCCGTCGATGGTTCTCTATGCACATGAGCTTGTGGCAGACTTT
GGTGTAAAGCGCATTATTCGTGTAGGTAGCCTAGGTGCGACTCAGCACGATGTGAAAATCAATGACGTCATCCTAGCTCA
AGCAGCAGGTACTGATTCTCCAACCAATGCTAAGCGCAGCAGCGGCTATCAGATGGCAACATCTGCCACCTTTGACCTGC
TACACAAGGCCTACATGATTGCCCAGAAAAAGCAGATCAACGTTAAAGTGGGTAACGTGTTTAGTGGTGACATGTATTAC
GACCCTGACGAAGACATGATCCCAGCCCTTGAGCGTTTCGGCGTACTGGGTGTTGATATGGAAGTAGCTGGCCTTTATGG
TCTTGCTCACCATAAGGGTTTTGAGTCCCTAGCAATTTTAACTGTATCGGATCACTGCTTAACTGGCGAAGAGACCAGTG
CAGAGGCTCGCCAGTTAACTTTCAATCAAATGATCGAGCTGGCATTAGAAACAGCCTGTCAGTAA

Upstream 100 bases:

>100_bases
GAAGAAAAACTGCCCATATATCGCTCTATGCGGACTTATGTCCTCTATGCATTCACCCATGGCAATTACTATCGCCTGTA
ATCAAAAAAGAGGATTACTC

Downstream 100 bases:

>100_bases
ATCTGAATAAGCCGCTCGAAGCCTAGCTTCCAGCGGCTTACTTTTTATTTGCTAGTTTTTTGTAATTAGCTTTTGATACA
GCAAAATTAGGAACAGATGA

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP [H]

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MTAHISGKAGDFAETIIMPGDPLRAKYIAENFLEDAVEVTNIRNMLGYTGFYKGQRISVMGHGMGIPSMVLYAHELVADF
GVKRIIRVGSLGATQHDVKINDVILAQAAGTDSPTNAKRSSGYQMATSATFDLLHKAYMIAQKKQINVKVGNVFSGDMYY
DPDEDMIPALERFGVLGVDMEVAGLYGLAHHKGFESLAILTVSDHCLTGEETSAEARQLTFNQMIELALETACQ

Sequences:

>Translated_234_residues
MTAHISGKAGDFAETIIMPGDPLRAKYIAENFLEDAVEVTNIRNMLGYTGFYKGQRISVMGHGMGIPSMVLYAHELVADF
GVKRIIRVGSLGATQHDVKINDVILAQAAGTDSPTNAKRSSGYQMATSATFDLLHKAYMIAQKKQINVKVGNVFSGDMYY
DPDEDMIPALERFGVLGVDMEVAGLYGLAHHKGFESLAILTVSDHCLTGEETSAEARQLTFNQMIELALETACQ
>Mature_233_residues
TAHISGKAGDFAETIIMPGDPLRAKYIAENFLEDAVEVTNIRNMLGYTGFYKGQRISVMGHGMGIPSMVLYAHELVADFG
VKRIIRVGSLGATQHDVKINDVILAQAAGTDSPTNAKRSSGYQMATSATFDLLHKAYMIAQKKQINVKVGNVFSGDMYYD
PDEDMIPALERFGVLGVDMEVAGLYGLAHHKGFESLAILTVSDHCLTGEETSAEARQLTFNQMIELALETACQ

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family [H]

Homologues:

Organism=Escherichia coli, GI1790844, Length=230, Percent_Identity=54.7826086956522, Blast_Score=264, Evalue=3e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR000845 [H]

Pfam domain/function: PF01048 PNP_UDP_1 [H]

EC number: =2.4.2.1 [H]

Molecular weight: Translated: 25455; Mature: 25324

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAHISGKAGDFAETIIMPGDPLRAKYIAENFLEDAVEVTNIRNMLGYTGFYKGQRISVM
CCEECCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GHGMGIPSMVLYAHELVADFGVKRIIRVGSLGATQHDVKINDVILAQAAGTDSPTNAKRS
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCHHC
SGYQMATSATFDLLHKAYMIAQKKQINVKVGNVFSGDMYYDPDEDMIPALERFGVLGVDM
CCCEEHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCEEECCCCHHHHHHHHCCEECCCH
EVAGLYGLAHHKGFESLAILTVSDHCLTGEETSAEARQLTFNQMIELALETACQ
HHHHHHHHHHHCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TAHISGKAGDFAETIIMPGDPLRAKYIAENFLEDAVEVTNIRNMLGYTGFYKGQRISVM
CEECCCCCCCCHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
GHGMGIPSMVLYAHELVADFGVKRIIRVGSLGATQHDVKINDVILAQAAGTDSPTNAKRS
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEECCCCCCCCCHHC
SGYQMATSATFDLLHKAYMIAQKKQINVKVGNVFSGDMYYDPDEDMIPALERFGVLGVDM
CCCEEHHHHHHHHHHHHHHHHHHHEEEEEECCEEECCEEECCCCHHHHHHHHCCEECCCH
EVAGLYGLAHHKGFESLAILTVSDHCLTGEETSAEARQLTFNQMIELALETACQ
HHHHHHHHHHHCCCCEEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]