| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963572
Identifier: 157963572
GI number: 157963572
Start: 4574362
End: 4574892
Strand: Reverse
Name: 157963572
Synonym: Spea_3760
Alternate gene names: NA
Gene position: 4574892-4574362 (Counterclockwise)
Preceding gene: 157963573
Following gene: 157963571
Centisome position: 88.41
GC content: 41.24
Gene sequence:
>531_bases ATGAAAATGCAAAAGCAAAGTGGTTTTACCCTAATTGAATTAGTGGTCGTGATCATCATTCTAGGTATCTTAGCGGTTAC CGCTGCACCTAAATTTATCAACTTACAGAGCGATGCGCGTGCATCAACTCTTCAAGGTATGAAAGGTGCATTACAAGGTG CTAACTCACTGGTTTTCTCTAAGGCTGCAATTGCTAGTGAAGAGAAGAAAGGCTCTGTTGATGGTACTACGGGACTAGGT TCTGTAGATATTGGTACAGGAGCAGGAAACGAAGCTACGACTAACTATGGCTACTTAATTTCAACTGCAGATCAGTTGAA GAATGCTCTCGATGTTAATATGAGTGACTCTGAGACTGATGGTTTTGACTGGTATATTAAAGAAGGAACTAATCCTGCTT CAGCTTCTCAAATTTATCAAGCTGGCTCACCTCGCTACGGCGATGCGACTAAGAAGTGCTATATTGAGTATACACCTGCT ACATCAGCAACAACTTCTCCTAAATATGTTGTTGAAGATGACGACTGCTAA
Upstream 100 bases:
>100_bases AATCTTGCCAACTTGTTTACACAGAAGCTGAAGATGCTAACACAGTACCTACATACGAAATTACTGACACTGGCTGTTAA GCTGACCTGTTGAAGAGAAA
Downstream 100 bases:
>100_bases TTAGCAATCTTTTGAAAAGGCCTGCCTCGCAGGCCTTTTTTGTATCTAGGGCGTTAGTTGTGGCTTTATTTGCCATAATT ATTAAACTGTTGGAAAATCA
Product: methylation site containing protein
Products: NA
Alternate protein names: MSHA Pilin Protein MshA; MshA Mannose-Sensitive Haemaglutinin; Type IV Pilus Mannose-Sensitive Hemagglutinin A; MAnnose-Sensitive Hemagglutinin A; Msha Pilin Protein Msha; Methylation
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKMQKQSGFTLIELVVVIIILGILAVTAAPKFINLQSDARASTLQGMKGALQGANSLVFSKAAIASEEKKGSVDGTTGLG SVDIGTGAGNEATTNYGYLISTADQLKNALDVNMSDSETDGFDWYIKEGTNPASASQIYQAGSPRYGDATKKCYIEYTPA TSATTSPKYVVEDDDC
Sequences:
>Translated_176_residues MKMQKQSGFTLIELVVVIIILGILAVTAAPKFINLQSDARASTLQGMKGALQGANSLVFSKAAIASEEKKGSVDGTTGLG SVDIGTGAGNEATTNYGYLISTADQLKNALDVNMSDSETDGFDWYIKEGTNPASASQIYQAGSPRYGDATKKCYIEYTPA TSATTSPKYVVEDDDC >Mature_176_residues MKMQKQSGFTLIELVVVIIILGILAVTAAPKFINLQSDARASTLQGMKGALQGANSLVFSKAAIASEEKKGSVDGTTGLG SVDIGTGAGNEATTNYGYLISTADQLKNALDVNMSDSETDGFDWYIKEGTNPASASQIYQAGSPRYGDATKKCYIEYTPA TSATTSPKYVVEDDDC
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18513; Mature: 18513
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMQKQSGFTLIELVVVIIILGILAVTAAPKFINLQSDARASTLQGMKGALQGANSLVFS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH KAAIASEEKKGSVDGTTGLGSVDIGTGAGNEATTNYGYLISTADQLKNALDVNMSDSETD HHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCC GFDWYIKEGTNPASASQIYQAGSPRYGDATKKCYIEYTPATSATTSPKYVVEDDDC CEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCC >Mature Secondary Structure MKMQKQSGFTLIELVVVIIILGILAVTAAPKFINLQSDARASTLQGMKGALQGANSLVFS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHHCCCHHHHH KAAIASEEKKGSVDGTTGLGSVDIGTGAGNEATTNYGYLISTADQLKNALDVNMSDSETD HHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCEEEECHHHHHHHHCCCCCCCCCC GFDWYIKEGTNPASASQIYQAGSPRYGDATKKCYIEYTPATSATTSPKYVVEDDDC CEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA