| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yjgA [C]
Identifier: 157963553
GI number: 157963553
Start: 4547231
End: 4547773
Strand: Direct
Name: yjgA [C]
Synonym: Spea_3741
Alternate gene names: 157963553
Gene position: 4547231-4547773 (Clockwise)
Preceding gene: 157963551
Following gene: 157963554
Centisome position: 87.88
GC content: 39.59
Gene sequence:
>543_bases ATGAAGATTGTCGGTGACTCAGAACACTTCCACCAGCCCTATGATAAAGATGAGAACTACGAAAGTAGAGCGGACGCTAA ACGCGAAATCGCCATCTATCAAGAATATGGCAATAGATTAGTTGCACTTAGTAAGACCCAGGTACAGAAGCTAAATCTTG ATGAAACGCTTTATGATAATGTTTTGAAAGCTAAAACTATCAAAATTAATACCGAAGCGCACCGTCGTCACATTCAGTAC ATTGGTAAACTAATGCGTTATGTCGATCTCGAAGAGTTAGAGGTCGCGATTAAGAACGTGCTGAACCAAAACAGCAACGA AAGTGCTAGAACCAATGTGGCTGACAAGACACGTGATCAGCTGTTAGCTGAAGGTGATTCTGCAGTACAGGCCTTAATTG AGCAGCACCCTGAATTTGATAGACAGAAACTTCGTCAGTATATTCGTCAGACAAAAAAAGAGCTAACGAAAAACCCTGAT ATTGAAGCATCAAAGACAGCTAAAGAATTAAGTAAATATTTACGTAACGAGATCAAAGATTAA
Upstream 100 bases:
>100_bases ACAAATCACCGCTTTAGCCAGCGCAACAACTAAAATAGGAAAGGAAATAAGCAAGTATAGATGTTATTATTAGCTCAGAA TTTGTAAGAGATTTTTAGAT
Downstream 100 bases:
>100_bases CCGTTACATATATAGACATCACTTCTATATAACTACACAATAGCTCCCTAAGTCTTAACACGACTTTGGGAGCTTTTTTA TTGGTCTGTCTTCGGCTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDNVLKAKTIKINTEAHRRHIQY IGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQLLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPD IEASKTAKELSKYLRNEIKD
Sequences:
>Translated_180_residues MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDNVLKAKTIKINTEAHRRHIQY IGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQLLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPD IEASKTAKELSKYLRNEIKD >Mature_180_residues MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDNVLKAKTIKINTEAHRRHIQY IGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQLLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPD IEASKTAKELSKYLRNEIKD
Specific function: Unknown
COG id: COG3028
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0307 family [H]
Homologues:
Organism=Escherichia coli, GI1790681, Length=156, Percent_Identity=31.4102564102564, Blast_Score=78, Evalue=3e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023153 - InterPro: IPR006839 [H]
Pfam domain/function: PF04751 DUF615 [H]
EC number: NA
Molecular weight: Translated: 21061; Mature: 21061
Theoretical pI: Translated: 7.84; Mature: 7.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDN CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCHHHHHHH VLKAKTIKINTEAHRRHIQYIGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQ HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPDIEASKTAKELSKYLRNEIKD HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIVGDSEHFHQPYDKDENYESRADAKREIAIYQEYGNRLVALSKTQVQKLNLDETLYDN CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHCCCHHHHHHH VLKAKTIKINTEAHRRHIQYIGKLMRYVDLEELEVAIKNVLNQNSNESARTNVADKTRDQ HHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LLAEGDSAVQALIEQHPEFDRQKLRQYIRQTKKELTKNPDIEASKTAKELSKYLRNEIKD HHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA