Click here to switch to the map view.

The map label for this gene is ybaP [C]

Identifier: 157963534

GI number: 157963534

Start: 4528997

End: 4529881

Strand: Reverse

Name: ybaP [C]

Synonym: Spea_3722

Alternate gene names: 157963534

Gene position: 4529881-4528997 (Counterclockwise)

Preceding gene: 157963537

Following gene: 157963533

Centisome position: 87.54

GC content: 47.68

Gene sequence:

>885_bases
ATGATCGCAACAAGTGTCGTTAGGCGTTTATTCACATCAGTAGGGCTAGCCATGCTGTTTGTGTCATTAGCAACTAAAGC
TGATCCAGGTGATAAACCGCCGTTTTATCAAATATCATATCAAGGGCAGATAGCTTATCTATTGGGCTCAATCCATATTG
GCGAGGCTAACTTTTTCCCTTTAGCTGATCAGATAGAACAGGCTTATCAAAACTCTGCGGCGTTAGTGGTTGAGGCCGAT
ATTAGAGATGCCAATGTGCCAGCGTTATTAGCAAAATATGGCTCAAAGCAGCTGCCTATGGATGCTGAAACGCAGTCGAT
ACTTTCCCAGTATTGCCAAGATAAGTTAAGCTTCTGCGCTGCAATTCAAAGCTATGCGCCCTGGCTACAGTCGATGCAGG
TCAGCATAGGTCGCTATGCCGCGTTAGGGTATAGCGGGAACTATGGGGTTGACGCCGTACTCGTAGAAAAGGCGGGAACC
AAGCCTATATACCAACTGGAAAGTGCCGAGTTTCAATTTGAACTCTTGTCATCATTCGATGCAGACACTCAATGGAGCAT
GGTGCGCGAGGCGATAGAGGCCCCAGATGCCGATATGCTTAAGCTAATTTCAGCCTGGCGCAGCGGTGATGAAACCGAGT
TAGCCGATTTGATGGAAGGGGAAATGCTCCGCGAAGGCGAAACAGAAATGGTTGAAAAAATGCTATGGGGACGCAACCAA
ACCATGGCGCAAGGCATCGTTAAACTGATGCAGTCAGCGGATACCGCCCAGCCCCTGTTTGTTGTCGTGGGCGCGGGGCA
CTTAGTTGGCCAAAAGAGTGTTCAATCTTATTTACTACCTTTGGGGGTAGAGGCTAAAAACTGTTGGAAACAGCAGTGTT
TATAA

Upstream 100 bases:

>100_bases
GATAGGCGGTTTGCAAACTGGCTTTAAGTTGCTCGATAACCTGTGTGTGTGGCATAACAGCCTCTCAATTAGACATTTTG
CTGAATTATAAGGGGCAAGG

Downstream 100 bases:

>100_bases
GATGAAAATTCTTCACACAGGGCGCAATTATCGAGTTTGGCAGTTTTGAGGTATAATGCGCCGCCTATTTTGGTTTTCCT
GTCATTTTGAAAGGTTTTAT

Product: GumN family protein

Products: NA

Alternate protein names: GumN Protein; Gumn Family Protein; SLA2 Protein; GumN Protein Superfamily; GumN-Family Protein

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MIATSVVRRLFTSVGLAMLFVSLATKADPGDKPPFYQISYQGQIAYLLGSIHIGEANFFPLADQIEQAYQNSAALVVEAD
IRDANVPALLAKYGSKQLPMDAETQSILSQYCQDKLSFCAAIQSYAPWLQSMQVSIGRYAALGYSGNYGVDAVLVEKAGT
KPIYQLESAEFQFELLSSFDADTQWSMVREAIEAPDADMLKLISAWRSGDETELADLMEGEMLREGETEMVEKMLWGRNQ
TMAQGIVKLMQSADTAQPLFVVVGAGHLVGQKSVQSYLLPLGVEAKNCWKQQCL

Sequences:

>Translated_294_residues
MIATSVVRRLFTSVGLAMLFVSLATKADPGDKPPFYQISYQGQIAYLLGSIHIGEANFFPLADQIEQAYQNSAALVVEAD
IRDANVPALLAKYGSKQLPMDAETQSILSQYCQDKLSFCAAIQSYAPWLQSMQVSIGRYAALGYSGNYGVDAVLVEKAGT
KPIYQLESAEFQFELLSSFDADTQWSMVREAIEAPDADMLKLISAWRSGDETELADLMEGEMLREGETEMVEKMLWGRNQ
TMAQGIVKLMQSADTAQPLFVVVGAGHLVGQKSVQSYLLPLGVEAKNCWKQQCL
>Mature_294_residues
MIATSVVRRLFTSVGLAMLFVSLATKADPGDKPPFYQISYQGQIAYLLGSIHIGEANFFPLADQIEQAYQNSAALVVEAD
IRDANVPALLAKYGSKQLPMDAETQSILSQYCQDKLSFCAAIQSYAPWLQSMQVSIGRYAALGYSGNYGVDAVLVEKAGT
KPIYQLESAEFQFELLSSFDADTQWSMVREAIEAPDADMLKLISAWRSGDETELADLMEGEMLREGETEMVEKMLWGRNQ
TMAQGIVKLMQSADTAQPLFVVVGAGHLVGQKSVQSYLLPLGVEAKNCWKQQCL

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32323; Mature: 32323

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIATSVVRRLFTSVGLAMLFVSLATKADPGDKPPFYQISYQGQIAYLLGSIHIGEANFFP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCC
LADQIEQAYQNSAALVVEADIRDANVPALLAKYGSKQLPMDAETQSILSQYCQDKLSFCA
CHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AIQSYAPWLQSMQVSIGRYAALGYSGNYGVDAVLVEKAGTKPIYQLESAEFQFELLSSFD
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHHHHCC
ADTQWSMVREAIEAPDADMLKLISAWRSGDETELADLMEGEMLREGETEMVEKMLWGRNQ
CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
TMAQGIVKLMQSADTAQPLFVVVGAGHLVGQKSVQSYLLPLGVEAKNCWKQQCL
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MIATSVVRRLFTSVGLAMLFVSLATKADPGDKPPFYQISYQGQIAYLLGSIHIGEANFFP
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEEEEECCCCCCC
LADQIEQAYQNSAALVVEADIRDANVPALLAKYGSKQLPMDAETQSILSQYCQDKLSFCA
CHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AIQSYAPWLQSMQVSIGRYAALGYSGNYGVDAVLVEKAGTKPIYQLESAEFQFELLSSFD
HHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEECCCCCCCEECCCCHHHHHHHHHCC
ADTQWSMVREAIEAPDADMLKLISAWRSGDETELADLMEGEMLREGETEMVEKMLWGRNQ
CCCHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCH
TMAQGIVKLMQSADTAQPLFVVVGAGHLVGQKSVQSYLLPLGVEAKNCWKQQCL
HHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA