Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963520

Identifier: 157963520

GI number: 157963520

Start: 4514577

End: 4515137

Strand: Reverse

Name: 157963520

Synonym: Spea_3708

Alternate gene names: NA

Gene position: 4515137-4514577 (Counterclockwise)

Preceding gene: 157963521

Following gene: 157963515

Centisome position: 87.26

GC content: 39.22

Gene sequence:

>561_bases
ATGAGTGAGCTATTACTTTGCATTCATTTATCAAGGCTTCCTTATTTTAGTATTGGAACTCAATTACTCATGCGTGAACT
TTTTGAACGTTTTCTCTGGAGCAGCCGTTTATCGGTCATGTTTGGTGTCTTGTCATGTATTGTGGCGGCGTTTGTCGTTT
TTGCCATGGGGCTGAGAGATGTAGTGCACATGATTGAGCTGATTATGGGTTATATATTTAGCGGTAGCCATGCAGTGCGT
AATGATCTAGTGATGGTGGTGGTGGAGATCTTAGATACATTCTTATTAGGCGCAGTTTTGCTTATCTTTGCTTTTGGTTT
ATACGAGCTATTTATTAGTAACCTGAAAAGTGCCGGTACAAGTGAAGCAGGCGGTAAAATTCTGATCATTAGCAGTATAG
ATTCATTAAAGAGTAAGCTAGGTAAGGTGATCTTAATGATGCTGATCATTAAGGTATTCTCTTTCTTTACCGAAATGAAA
CCAACTTCTATGCTTGAGCTACTCTATATGGGCATTACCGTAGTATTGATCGCAGGAGCTTTGAAGCTTAGCAAAGACTA
A

Upstream 100 bases:

>100_bases
TTAGCTAAGATGATGAAGTGTGACCAGGTTCACGAATTGTTGTGAATTTTCTGTAGTAGGCAAGGGCTTATTCTACACTC
CCGCCTATTCTAAGGTTTTG

Downstream 100 bases:

>100_bases
CTTCATACTTCGCTTTGTCCCGTCCTGAAATAGGTTGACGGTTTTTACTAGACCAGTAGCTTCTGCTGCTGGTCTTTTTT
ATGCACTTGATTAGGTGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MSELLLCIHLSRLPYFSIGTQLLMRELFERFLWSSRLSVMFGVLSCIVAAFVVFAMGLRDVVHMIELIMGYIFSGSHAVR
NDLVMVVVEILDTFLLGAVLLIFAFGLYELFISNLKSAGTSEAGGKILIISSIDSLKSKLGKVILMMLIIKVFSFFTEMK
PTSMLELLYMGITVVLIAGALKLSKD

Sequences:

>Translated_186_residues
MSELLLCIHLSRLPYFSIGTQLLMRELFERFLWSSRLSVMFGVLSCIVAAFVVFAMGLRDVVHMIELIMGYIFSGSHAVR
NDLVMVVVEILDTFLLGAVLLIFAFGLYELFISNLKSAGTSEAGGKILIISSIDSLKSKLGKVILMMLIIKVFSFFTEMK
PTSMLELLYMGITVVLIAGALKLSKD
>Mature_185_residues
SELLLCIHLSRLPYFSIGTQLLMRELFERFLWSSRLSVMFGVLSCIVAAFVVFAMGLRDVVHMIELIMGYIFSGSHAVRN
DLVMVVVEILDTFLLGAVLLIFAFGLYELFISNLKSAGTSEAGGKILIISSIDSLKSKLGKVILMMLIIKVFSFFTEMKP
TSMLELLYMGITVVLIAGALKLSKD

Specific function: Unknown

COG id: COG2862

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20659; Mature: 20527

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELLLCIHLSRLPYFSIGTQLLMRELFERFLWSSRLSVMFGVLSCIVAAFVVFAMGLRD
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVHMIELIMGYIFSGSHAVRNDLVMVVVEILDTFLLGAVLLIFAFGLYELFISNLKSAGT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEAGGKILIISSIDSLKSKLGKVILMMLIIKVFSFFTEMKPTSMLELLYMGITVVLIAGA
CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LKLSKD
HHHCCC
>Mature Secondary Structure 
SELLLCIHLSRLPYFSIGTQLLMRELFERFLWSSRLSVMFGVLSCIVAAFVVFAMGLRD
CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVHMIELIMGYIFSGSHAVRNDLVMVVVEILDTFLLGAVLLIFAFGLYELFISNLKSAGT
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SEAGGKILIISSIDSLKSKLGKVILMMLIIKVFSFFTEMKPTSMLELLYMGITVVLIAGA
CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LKLSKD
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA