| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963513
Identifier: 157963513
GI number: 157963513
Start: 4501060
End: 4503465
Strand: Reverse
Name: 157963513
Synonym: Spea_3701
Alternate gene names: NA
Gene position: 4503465-4501060 (Counterclockwise)
Preceding gene: 157963514
Following gene: 157963512
Centisome position: 87.03
GC content: 51.25
Gene sequence:
>2406_bases ATGAGACCCTATAAGCTCGCGCTGGCTATCGCACTCGCCGTTGTACCTATGACTAGCGCTGTGGCTGCCACCACAAATAC CGCCACACTGATTAAAAACAGTCAGGCAGCGACAGGTTTCATCAATCTGTTTTATGACAAAGCCTCGGGGGAACTTTACC TAGAAGCCAATAAGCTAGATAAACCCTTCTTAATGCTTACTAGCTTGCCCCATGGTGTCGGATCCAATGATATAGGGCTA GACAGAGGTCAGCTTGGCCGCACTCGTATGGTGCAATTTGAGCGTCATGGCCCGTACCTGATTTTAAAGCAGCTCAATAC CCACTATCGCGCCAATACCGAAAATGCTGCCGAGCAGCGAGCGGTAAAGGAAGCCTTTGCCGAGTCTGTGTTATGGCGAG GTAAACTGGTAACTGGTAAGCGTAATCTGGTGGCGATTAACGACTTAGTGGTTAACGATCTGCACGGTATTAGTGATGTG TTAGAGCAGACTAAGCAGGGCAGCTATCAGTTAGATCCATCAAAGTCGTTGATCTTGCCTGAAGGAGTCAAATCCTTCGA GCGCAATAGCGATATCGACGTTCTGTTAACCTTCAATGCCGCCAAGGCGGGTAACTATGTGGCGCAGGTAACACCCGATG GCAAGCACTTATCGGTTCGCTTACGTTACTCCTTTGTCGCGCTACCCGATGAGGGCTATCAGGCCCGCGCTTATCATCCG CTAAGCGGTTACTTATCGGATGAATATCTCGATTACGGCACCCGTGTCGATGAAGATATTCGTCAGCGATTCTTGCTGCG TCACCGACTCGAAAAGGTGACTCCAGGCTCGGCGCCAAGTCAAGTGGTTAAGCCTATTACCTATTATCTCGATCCCGGTG TCCCAGAGCCGATTAGAACGGCGCTGTTAGAGGGGGCAAGCTGGTGGGAAGATGCCTTCACTCATGCCGGTTTTATTAAT GGTTTCAAAGTCGAACTCTTGCCAGAAGATGCCGATCCACAAGATGTACGCTACAACATGATCCAGTGGGTGCACCGCGC TACTCGTGGCTGGTCTTACGGCTCAGCGGTTACCGATCCGCGCACAGGTGAAATCATTAAGGGTCATGTGACTCTTGGTA GCCAACGCGTTCGCCAAGATCACCTTATCGCCCGCGGACTAACCGCAGGCTGGGAAGACCGAGCCGCTGCAGACGAAGCT TCGATGGCACTCGCGCTTGCACGTATTCGCCAGTTGTCAGCCCATGAGGTTGGACACACATTGGGGCTGGATCATAACTT CTCTGCATCGAGTAATAACAACGCCTCGGTGATGGACTATCCACACCCTATGGTGACCATCAACGGCGATAAAATTGATA TCAGTAAGCCTTACGATGAAGGCATAGGTGCATGGGATAAATACACCGTGGCCTATGGCTATGGTGAGTACGGCGCTGCA GAAGAGGAAGCACTAGGGCTTGCAAAGCTTAGAGGCGATGTGGCTAAACAAGGTCTGAGATATATCGGCGAGGCAGATTC TCGCTCAGCGGGGGCGAGTAATGCCTATGCCAGCCTTTGGGATAACGGTAACGATCCTGTAGCCGAACTGACGCGACTAG GTGAAGTACGCGCCAAGGCAATAGCAGACTTCTCTGCCGATGCGCTACTGGCTGAGCAGCCACAAGGCGAACTACAAGAT GCGTTTGTGCCTATCTATCTGCTAACCCGCTTTCAGATTGCGGCTGCGGCTAAGATGATTGGCGGCACCACCTATGACTA TGGTGATGGAGTCGATAGTAAAAGCTGGCACTATGTTGCCCCTGCCATGCAGTTGCAGGCACTAGAGGCCTTATTAGCGA CACTATCGCCAGATGAACTCGCCGTGGAAGAGAGTCTCGAGCAAGTGTTAGTGCCTAAGGCGGGTAACTACTATAAGACT CGCGAGAGCTTCGATTCAGGCCTAGGAGTGATTACTGATCCCTTAGGTATGGCGGAGGTGTTGAGCCGTTTAACCCTGAC GCAAATCTATGCCCCAGAGCGTATGAACCGTGTCAATCAGGCCTACCTGAGTGATAAAGAACAGCTATCTGTTTCTAAGC TGACAGATAAGGTGCTCGCAAGCACAGTGTTTAGCGATATCCCGACAGGACCAGAGCTAGGTGTGTGGATGCGAGTTAAC ACTGTGACCATAGATAGCTTGTTAGCGGCTTACCATGCTCCTAAGACAAGACCTGAGGTTAAGGCGCAATTGGCTGAGCG TTTAGCCTATACGGTGAAGCAGCTTAAGCGTAAGGTGAAGCGAGTGAGTGCCTATGAAGCGGCCCATTATGCCTGGTTAC AACAAGGCATTGAAAAGGGGCTTAAGGATGCTAAGTACAAGCTGATTACTCAGCCGTTGGCACTGCCGCCAGGATCACCG ATTTAA
Upstream 100 bases:
>100_bases TTAAGCTAAACGTCAAATTAGCTTCCAAGCTACTCATTAATAATAAAGTCTATTGTAAGTAAGCGAATACGATAGCGACA ACAAAGATCAAGGAGATCGA
Downstream 100 bases:
>100_bases CTGCGGTAATTAATAGCGATATAAAGAGATAGCAAAAAGCGCGAGTGGTCGCGCTTTTTTTATAAAAAATCAATTAATTG CTTCGTCATTGAAACTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 801; Mature: 801
Protein sequence:
>801_residues MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLDKPFLMLTSLPHGVGSNDIGL DRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQRAVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDV LEQTKQGSYQLDPSKSLILPEGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRTALLEGASWWEDAFTHAGFIN GFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDPRTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEA SMALALARIRQLSAHEVGHTLGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKAIADFSADALLAEQPQGELQD AFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVAPAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKT RESFDSGLGVITDPLGMAEVLSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKGLKDAKYKLITQPLALPPGSP I
Sequences:
>Translated_801_residues MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLDKPFLMLTSLPHGVGSNDIGL DRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQRAVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDV LEQTKQGSYQLDPSKSLILPEGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRTALLEGASWWEDAFTHAGFIN GFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDPRTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEA SMALALARIRQLSAHEVGHTLGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKAIADFSADALLAEQPQGELQD AFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVAPAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKT RESFDSGLGVITDPLGMAEVLSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKGLKDAKYKLITQPLALPPGSP I >Mature_801_residues MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLDKPFLMLTSLPHGVGSNDIGL DRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQRAVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDV LEQTKQGSYQLDPSKSLILPEGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRTALLEGASWWEDAFTHAGFIN GFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDPRTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEA SMALALARIRQLSAHEVGHTLGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKAIADFSADALLAEQPQGELQD AFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVAPAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKT RESFDSGLGVITDPLGMAEVLSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKGLKDAKYKLITQPLALPPGSP I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 88103; Mature: 88103
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLD CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEECCCC KPFLMLTSLPHGVGSNDIGLDRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQR CCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHCCCCCHHHHHH AVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDVLEQTKQGSYQLDPSKSLILP HHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECC EGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCEEECC LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRT CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCHHHHH ALLEGASWWEDAFTHAGFINGFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDP HHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC RTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEASMALALARIRQLSAHEVGHT CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA CCCCCCCCCCCCCCCEEEECCCCEEEECCCEEECCCCHHHCCCCCCCEEEEECCCCCCCC EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH IADFSADALLAEQPQGELQDAFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVA HHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC PAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKTRESFDSGLGVITDPLGMAEV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEECCCCHHHH LSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKG EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDAKYKLITQPLALPPGSPI HHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLD CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEECCCC KPFLMLTSLPHGVGSNDIGLDRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQR CCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHCCCCCHHHHHH AVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDVLEQTKQGSYQLDPSKSLILP HHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECC EGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCEEECC LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRT CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCHHHHH ALLEGASWWEDAFTHAGFINGFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDP HHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC RTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEASMALALARIRQLSAHEVGHT CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA CCCCCCCCCCCCCCCEEEECCCCEEEECCCEEECCCCHHHCCCCCCCEEEEECCCCCCCC EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKA HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH IADFSADALLAEQPQGELQDAFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVA HHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC PAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKTRESFDSGLGVITDPLGMAEV HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEECCCCHHHH LSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKG EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LKDAKYKLITQPLALPPGSPI HHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA