Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963513

Identifier: 157963513

GI number: 157963513

Start: 4501060

End: 4503465

Strand: Reverse

Name: 157963513

Synonym: Spea_3701

Alternate gene names: NA

Gene position: 4503465-4501060 (Counterclockwise)

Preceding gene: 157963514

Following gene: 157963512

Centisome position: 87.03

GC content: 51.25

Gene sequence:

>2406_bases
ATGAGACCCTATAAGCTCGCGCTGGCTATCGCACTCGCCGTTGTACCTATGACTAGCGCTGTGGCTGCCACCACAAATAC
CGCCACACTGATTAAAAACAGTCAGGCAGCGACAGGTTTCATCAATCTGTTTTATGACAAAGCCTCGGGGGAACTTTACC
TAGAAGCCAATAAGCTAGATAAACCCTTCTTAATGCTTACTAGCTTGCCCCATGGTGTCGGATCCAATGATATAGGGCTA
GACAGAGGTCAGCTTGGCCGCACTCGTATGGTGCAATTTGAGCGTCATGGCCCGTACCTGATTTTAAAGCAGCTCAATAC
CCACTATCGCGCCAATACCGAAAATGCTGCCGAGCAGCGAGCGGTAAAGGAAGCCTTTGCCGAGTCTGTGTTATGGCGAG
GTAAACTGGTAACTGGTAAGCGTAATCTGGTGGCGATTAACGACTTAGTGGTTAACGATCTGCACGGTATTAGTGATGTG
TTAGAGCAGACTAAGCAGGGCAGCTATCAGTTAGATCCATCAAAGTCGTTGATCTTGCCTGAAGGAGTCAAATCCTTCGA
GCGCAATAGCGATATCGACGTTCTGTTAACCTTCAATGCCGCCAAGGCGGGTAACTATGTGGCGCAGGTAACACCCGATG
GCAAGCACTTATCGGTTCGCTTACGTTACTCCTTTGTCGCGCTACCCGATGAGGGCTATCAGGCCCGCGCTTATCATCCG
CTAAGCGGTTACTTATCGGATGAATATCTCGATTACGGCACCCGTGTCGATGAAGATATTCGTCAGCGATTCTTGCTGCG
TCACCGACTCGAAAAGGTGACTCCAGGCTCGGCGCCAAGTCAAGTGGTTAAGCCTATTACCTATTATCTCGATCCCGGTG
TCCCAGAGCCGATTAGAACGGCGCTGTTAGAGGGGGCAAGCTGGTGGGAAGATGCCTTCACTCATGCCGGTTTTATTAAT
GGTTTCAAAGTCGAACTCTTGCCAGAAGATGCCGATCCACAAGATGTACGCTACAACATGATCCAGTGGGTGCACCGCGC
TACTCGTGGCTGGTCTTACGGCTCAGCGGTTACCGATCCGCGCACAGGTGAAATCATTAAGGGTCATGTGACTCTTGGTA
GCCAACGCGTTCGCCAAGATCACCTTATCGCCCGCGGACTAACCGCAGGCTGGGAAGACCGAGCCGCTGCAGACGAAGCT
TCGATGGCACTCGCGCTTGCACGTATTCGCCAGTTGTCAGCCCATGAGGTTGGACACACATTGGGGCTGGATCATAACTT
CTCTGCATCGAGTAATAACAACGCCTCGGTGATGGACTATCCACACCCTATGGTGACCATCAACGGCGATAAAATTGATA
TCAGTAAGCCTTACGATGAAGGCATAGGTGCATGGGATAAATACACCGTGGCCTATGGCTATGGTGAGTACGGCGCTGCA
GAAGAGGAAGCACTAGGGCTTGCAAAGCTTAGAGGCGATGTGGCTAAACAAGGTCTGAGATATATCGGCGAGGCAGATTC
TCGCTCAGCGGGGGCGAGTAATGCCTATGCCAGCCTTTGGGATAACGGTAACGATCCTGTAGCCGAACTGACGCGACTAG
GTGAAGTACGCGCCAAGGCAATAGCAGACTTCTCTGCCGATGCGCTACTGGCTGAGCAGCCACAAGGCGAACTACAAGAT
GCGTTTGTGCCTATCTATCTGCTAACCCGCTTTCAGATTGCGGCTGCGGCTAAGATGATTGGCGGCACCACCTATGACTA
TGGTGATGGAGTCGATAGTAAAAGCTGGCACTATGTTGCCCCTGCCATGCAGTTGCAGGCACTAGAGGCCTTATTAGCGA
CACTATCGCCAGATGAACTCGCCGTGGAAGAGAGTCTCGAGCAAGTGTTAGTGCCTAAGGCGGGTAACTACTATAAGACT
CGCGAGAGCTTCGATTCAGGCCTAGGAGTGATTACTGATCCCTTAGGTATGGCGGAGGTGTTGAGCCGTTTAACCCTGAC
GCAAATCTATGCCCCAGAGCGTATGAACCGTGTCAATCAGGCCTACCTGAGTGATAAAGAACAGCTATCTGTTTCTAAGC
TGACAGATAAGGTGCTCGCAAGCACAGTGTTTAGCGATATCCCGACAGGACCAGAGCTAGGTGTGTGGATGCGAGTTAAC
ACTGTGACCATAGATAGCTTGTTAGCGGCTTACCATGCTCCTAAGACAAGACCTGAGGTTAAGGCGCAATTGGCTGAGCG
TTTAGCCTATACGGTGAAGCAGCTTAAGCGTAAGGTGAAGCGAGTGAGTGCCTATGAAGCGGCCCATTATGCCTGGTTAC
AACAAGGCATTGAAAAGGGGCTTAAGGATGCTAAGTACAAGCTGATTACTCAGCCGTTGGCACTGCCGCCAGGATCACCG
ATTTAA

Upstream 100 bases:

>100_bases
TTAAGCTAAACGTCAAATTAGCTTCCAAGCTACTCATTAATAATAAAGTCTATTGTAAGTAAGCGAATACGATAGCGACA
ACAAAGATCAAGGAGATCGA

Downstream 100 bases:

>100_bases
CTGCGGTAATTAATAGCGATATAAAGAGATAGCAAAAAGCGCGAGTGGTCGCGCTTTTTTTATAAAAAATCAATTAATTG
CTTCGTCATTGAAACTATCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 801; Mature: 801

Protein sequence:

>801_residues
MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLDKPFLMLTSLPHGVGSNDIGL
DRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQRAVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDV
LEQTKQGSYQLDPSKSLILPEGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP
LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRTALLEGASWWEDAFTHAGFIN
GFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDPRTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEA
SMALALARIRQLSAHEVGHTLGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA
EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKAIADFSADALLAEQPQGELQD
AFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVAPAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKT
RESFDSGLGVITDPLGMAEVLSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN
TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKGLKDAKYKLITQPLALPPGSP
I

Sequences:

>Translated_801_residues
MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLDKPFLMLTSLPHGVGSNDIGL
DRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQRAVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDV
LEQTKQGSYQLDPSKSLILPEGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP
LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRTALLEGASWWEDAFTHAGFIN
GFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDPRTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEA
SMALALARIRQLSAHEVGHTLGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA
EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKAIADFSADALLAEQPQGELQD
AFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVAPAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKT
RESFDSGLGVITDPLGMAEVLSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN
TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKGLKDAKYKLITQPLALPPGSP
I
>Mature_801_residues
MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLDKPFLMLTSLPHGVGSNDIGL
DRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQRAVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDV
LEQTKQGSYQLDPSKSLILPEGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP
LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRTALLEGASWWEDAFTHAGFIN
GFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDPRTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEA
SMALALARIRQLSAHEVGHTLGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA
EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKAIADFSADALLAEQPQGELQD
AFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVAPAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKT
RESFDSGLGVITDPLGMAEVLSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN
TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKGLKDAKYKLITQPLALPPGSP
I

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 88103; Mature: 88103

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEECCCC
KPFLMLTSLPHGVGSNDIGLDRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQR
CCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHCCCCCHHHHHH
AVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDVLEQTKQGSYQLDPSKSLILP
HHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECC
EGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP
HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCEEECC
LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRT
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCHHHHH
ALLEGASWWEDAFTHAGFINGFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDP
HHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEASMALALARIRQLSAHEVGHT
CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA
CCCCCCCCCCCCCCCEEEECCCCEEEECCCEEECCCCHHHCCCCCCCEEEEECCCCCCCC
EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
IADFSADALLAEQPQGELQDAFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVA
HHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC
PAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKTRESFDSGLGVITDPLGMAEV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEECCCCHHHH
LSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN
HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKG
EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDAKYKLITQPLALPPGSPI
HHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRPYKLALAIALAVVPMTSAVAATTNTATLIKNSQAATGFINLFYDKASGELYLEANKLD
CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEEEECCCCEEEEEECCCC
KPFLMLTSLPHGVGSNDIGLDRGQLGRTRMVQFERHGPYLILKQLNTHYRANTENAAEQR
CCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEECCCHHCCCCCHHHHHH
AVKEAFAESVLWRGKLVTGKRNLVAINDLVVNDLHGISDVLEQTKQGSYQLDPSKSLILP
HHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEECC
EGVKSFERNSDIDVLLTFNAAKAGNYVAQVTPDGKHLSVRLRYSFVALPDEGYQARAYHP
HHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCCEEEEEEEEEEEEECCCCCCCEEECC
LSGYLSDEYLDYGTRVDEDIRQRFLLRHRLEKVTPGSAPSQVVKPITYYLDPGVPEPIRT
CCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEEECCCCCHHHHH
ALLEGASWWEDAFTHAGFINGFKVELLPEDADPQDVRYNMIQWVHRATRGWSYGSAVTDP
HHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RTGEIIKGHVTLGSQRVRQDHLIARGLTAGWEDRAAADEASMALALARIRQLSAHEVGHT
CCCCEEEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGLDHNFSASSNNNASVMDYPHPMVTINGDKIDISKPYDEGIGAWDKYTVAYGYGEYGAA
CCCCCCCCCCCCCCCEEEECCCCEEEECCCEEECCCCHHHCCCCCCCEEEEECCCCCCCC
EEEALGLAKLRGDVAKQGLRYIGEADSRSAGASNAYASLWDNGNDPVAELTRLGEVRAKA
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHH
IADFSADALLAEQPQGELQDAFVPIYLLTRFQIAAAAKMIGGTTYDYGDGVDSKSWHYVA
HHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEC
PAMQLQALEALLATLSPDELAVEESLEQVLVPKAGNYYKTRESFDSGLGVITDPLGMAEV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCEECCCCHHHH
LSRLTLTQIYAPERMNRVNQAYLSDKEQLSVSKLTDKVLASTVFSDIPTGPELGVWMRVN
HHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
TVTIDSLLAAYHAPKTRPEVKAQLAERLAYTVKQLKRKVKRVSAYEAAHYAWLQQGIEKG
EEEHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKDAKYKLITQPLALPPGSPI
HHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA