| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963493
Identifier: 157963493
GI number: 157963493
Start: 4481991
End: 4482962
Strand: Reverse
Name: 157963493
Synonym: Spea_3681
Alternate gene names: NA
Gene position: 4482962-4481991 (Counterclockwise)
Preceding gene: 157963494
Following gene: 157963489
Centisome position: 86.63
GC content: 43.93
Gene sequence:
>972_bases ATGCCCCGCGCTAGAAGTACGCTAATAAGCTTGGAAGATACGCCTTACTATCACTGTTGTAGTCGTGTTGTTCGTCGCGC TTACTTGTGTGGTGATGATAAATACACGGGGAAGAACTATGACCATCGCCGTGGTTGGGTTGAGGCTCAGATACTGAAAT TAACAGAGGTGTTTGCGATAGATGTGGCTGCGTATGCTGTGATGAGTAATCATCTGCATGTGGTGCTTTATATCGACCTT GAAACAGTGAACAACTGGTCTGATAGGGAAGTAGTAGTACAGTGGCATATGTTGTTTAATGGCACTGATTTAACTCAGAA GTTTGCTAAAGGAGACGTAATTGAAGAGTGCATGGTAGCCACGCTAAAGCATTTGATAGCGACATACCGATCCCGCCTTA GTGATATCAGCTGGTTTATGCGTTGCTTGAATGAGCCTATCGCAAGACAAGCTAACTATGAAGACAATTGCACGGGGCAT TTCTGGGAAGGCCGATTTAAAAGCCAAGCATTACTTGATGAAGCTGCTGTGTTGGCTTGTATGGCTTATGTTGAGCTCAA TCCTATTCGTGCCAAGATAGCTAAGACCCCAGAACAATCTGATTTTACTAGCTTACAACTACGAGTGAACGCAGCCTTAA AAGGTAAACAACCTGCTAAGTTATTACCGTTTATTGGTAATGAGACAAAGCTCCAATCAAAAGGCATTAATTTCTCGCTG CAGGACTACCTCACTCTTGTCGACGAGACTGGGCGAATCATTCGTGATGATAAGCGAGGTGCTATTTCCCAAAGTGCTGA AAGGGTATTGGAAAGGCTTAATATTCCTAGTGAAAATTGGCTCAAGTTGGCTAGAGATTTTGGCAAGTTGTTTCACGGGC CTGTTGGGTCGCTGCAAGAGTTAACCAATTACTGCGAACATCTAGAAAAACGACGAAGGCACTTTACCAGTAGTTGCCAG TATCTTGGCTAA
Upstream 100 bases:
>100_bases TTTAAAACCCATTATAGACACCCATCCTCAATGGCATGTTTTGCTGCCTCTTACTAAGCTTTAACTGTTGGTTTAGTTAT TGCTGAAGTAGGAGGTTGTT
Downstream 100 bases:
>100_bases TTCAGCAGTTTAAATTTCACATTCAATATTGACCATAGGTTTGACACTCTATGCAGGCTCCCTTTTTCTAAATCTTATCA TTTAGCCGCTTAAATCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MPRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAIDVAAYAVMSNHLHVVLYIDL ETVNNWSDREVVVQWHMLFNGTDLTQKFAKGDVIEECMVATLKHLIATYRSRLSDISWFMRCLNEPIARQANYEDNCTGH FWEGRFKSQALLDEAAVLACMAYVELNPIRAKIAKTPEQSDFTSLQLRVNAALKGKQPAKLLPFIGNETKLQSKGINFSL QDYLTLVDETGRIIRDDKRGAISQSAERVLERLNIPSENWLKLARDFGKLFHGPVGSLQELTNYCEHLEKRRRHFTSSCQ YLG
Sequences:
>Translated_323_residues MPRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAIDVAAYAVMSNHLHVVLYIDL ETVNNWSDREVVVQWHMLFNGTDLTQKFAKGDVIEECMVATLKHLIATYRSRLSDISWFMRCLNEPIARQANYEDNCTGH FWEGRFKSQALLDEAAVLACMAYVELNPIRAKIAKTPEQSDFTSLQLRVNAALKGKQPAKLLPFIGNETKLQSKGINFSL QDYLTLVDETGRIIRDDKRGAISQSAERVLERLNIPSENWLKLARDFGKLFHGPVGSLQELTNYCEHLEKRRRHFTSSCQ YLG >Mature_322_residues PRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAIDVAAYAVMSNHLHVVLYIDLE TVNNWSDREVVVQWHMLFNGTDLTQKFAKGDVIEECMVATLKHLIATYRSRLSDISWFMRCLNEPIARQANYEDNCTGHF WEGRFKSQALLDEAAVLACMAYVELNPIRAKIAKTPEQSDFTSLQLRVNAALKGKQPAKLLPFIGNETKLQSKGINFSLQ DYLTLVDETGRIIRDDKRGAISQSAERVLERLNIPSENWLKLARDFGKLFHGPVGSLQELTNYCEHLEKRRRHFTSSCQY LG
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37130; Mature: 36999
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAI CCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH DVAAYAVMSNHLHVVLYIDLETVNNWSDREVVVQWHMLFNGTDLTQKFAKGDVIEECMVA HHHHHHHHHCCEEEEEEEEEEECCCCCCCEEEEEEEHHCCCCHHHHHHHCCHHHHHHHHH TLKHLIATYRSRLSDISWFMRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLAC HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH MAYVELNPIRAKIAKTPEQSDFTSLQLRVNAALKGKQPAKLLPFIGNETKLQSKGINFSL HHHHHCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHCCCCCCCCCHHHCCCCEEH QDYLTLVDETGRIIRDDKRGAISQSAERVLERLNIPSENWLKLARDFGKLFHGPVGSLQE HHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH LTNYCEHLEKRRRHFTSSCQYLG HHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PRARSTLISLEDTPYYHCCSRVVRRAYLCGDDKYTGKNYDHRRGWVEAQILKLTEVFAI CCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHH DVAAYAVMSNHLHVVLYIDLETVNNWSDREVVVQWHMLFNGTDLTQKFAKGDVIEECMVA HHHHHHHHHCCEEEEEEEEEEECCCCCCCEEEEEEEHHCCCCHHHHHHHCCHHHHHHHHH TLKHLIATYRSRLSDISWFMRCLNEPIARQANYEDNCTGHFWEGRFKSQALLDEAAVLAC HHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH MAYVELNPIRAKIAKTPEQSDFTSLQLRVNAALKGKQPAKLLPFIGNETKLQSKGINFSL HHHHHCCHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCHHCCCCCCCCCHHHCCCCEEH QDYLTLVDETGRIIRDDKRGAISQSAERVLERLNIPSENWLKLARDFGKLFHGPVGSLQE HHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHH LTNYCEHLEKRRRHFTSSCQYLG HHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA