| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963489
Identifier: 157963489
GI number: 157963489
Start: 4478257
End: 4479435
Strand: Reverse
Name: 157963489
Synonym: Spea_3677
Alternate gene names: NA
Gene position: 4479435-4478257 (Counterclockwise)
Preceding gene: 157963493
Following gene: 157963487
Centisome position: 86.57
GC content: 43.26
Gene sequence:
>1179_bases TTGTTGCCCTCATTATTTAAGTTGAAAGTGCTATGTATTGCGGCTCTGCTCCCCAGCACATTGCTGGCAAATGAGCTGGT TAAAGTGGAAGTGATAGCAAGCAATAATTATCAAACTAACATGGTCGTGGCGGCGAAAGAGGGGAGCTTTAAGCAAGATC CTGAACTTGTTGCTTATGTGTTTGAACGGGCCAAATTCAAGCAGTATCAAGAGCCACAACTGTTTATTGAGGTGATGGAT TGGGTTGCAAGCCAATGGCAACACGATGGGCTTAATGAAGCACCGAGCGAGATGAGTTCGTTAGACATTCTAAAGTCGGT GCATCAGCAAGGTACAAGGTATCGCTGTGTTGAATACGGTAAGGTGATGGCCGATATTTTGTCTGCGATGGGGCATCATT CTCGGCAGATTGGTTTGCAGTCAAGCGATGTCGCCTATGGTGGTTGGGGGAAAGGCCATGTTGCTACCGAGGTTTGGTCT AATGACTTAAACAAATGGGTATTCTTCGACCCACAATTTAGTACCTATGCTCAATATGAGGGGCAGTACCTCAACATTCA TGACATGTACCGCTTAAAGCGGCAGGGTAAATTTGAACAAATATCATTTATTGTCACCAGCAATTTTGCCAAAGTGAATG ATATCAAGCAGCAAGATAACCAAGCGGGCTATAGTCAATTTTTAACGAACTACTTTGGTTATCATGTTGCGTCGCAGCAG ATTGGCGATAAAAAACAGAGCACAGTGCTGATGATGGAGGCAAAAGAGCCATTTCTTACTTTTCAGGGGATGGGGTCTAA CAGGACTAAGTTGTTTACCAAAGCTGTTGAAATTGCTTACCCGAAAATGAATCAAACATTTTTCTCTATGTCTGCATTAC CTAATGCTGACGTGAGCTTTCAGTCGGTCATGCAACAGAACAAAATCGAATCAGAACAAGATTACCTTGATAATATGTGG CGCTTTGCCGCGCAGGGCAAAGTGGCTATGACTCTGTATAATAATATGCAGCAGTTTTCTCACTATCAGCTTAAAACCAA TCAAAATGATTGGATTGAGCATAAAGCTGCTGAATACACATGGGAATTGCAAAACGGTATCAACCGGTTTGAAGTAAGAA GTGTCTCTAACGAAGGCGTTATTGGACCCATGACTTTCGCTGAGGTGCGCTACCAGTAG
Upstream 100 bases:
>100_bases GTTAGATAGTATGTTATTGATTTTAAATAAAGACAGACTGCTTGTTGGCTAGCTTGTTATCGCAGTCGGTACTCATCCAT CATTTACAAGGAATTGAATT
Downstream 100 bases:
>100_bases CTATAAAAAAATCCCTACTTATTGCTAAGTAGGGATTTTTGATTTTAATCTAACTCGGTTTAAAGCGGCTTAAGTTGCTT AGCGTTAGTCGCTTGGTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MLPSLFKLKVLCIAALLPSTLLANELVKVEVIASNNYQTNMVVAAKEGSFKQDPELVAYVFERAKFKQYQEPQLFIEVMD WVASQWQHDGLNEAPSEMSSLDILKSVHQQGTRYRCVEYGKVMADILSAMGHHSRQIGLQSSDVAYGGWGKGHVATEVWS NDLNKWVFFDPQFSTYAQYEGQYLNIHDMYRLKRQGKFEQISFIVTSNFAKVNDIKQQDNQAGYSQFLTNYFGYHVASQQ IGDKKQSTVLMMEAKEPFLTFQGMGSNRTKLFTKAVEIAYPKMNQTFFSMSALPNADVSFQSVMQQNKIESEQDYLDNMW RFAAQGKVAMTLYNNMQQFSHYQLKTNQNDWIEHKAAEYTWELQNGINRFEVRSVSNEGVIGPMTFAEVRYQ
Sequences:
>Translated_392_residues MLPSLFKLKVLCIAALLPSTLLANELVKVEVIASNNYQTNMVVAAKEGSFKQDPELVAYVFERAKFKQYQEPQLFIEVMD WVASQWQHDGLNEAPSEMSSLDILKSVHQQGTRYRCVEYGKVMADILSAMGHHSRQIGLQSSDVAYGGWGKGHVATEVWS NDLNKWVFFDPQFSTYAQYEGQYLNIHDMYRLKRQGKFEQISFIVTSNFAKVNDIKQQDNQAGYSQFLTNYFGYHVASQQ IGDKKQSTVLMMEAKEPFLTFQGMGSNRTKLFTKAVEIAYPKMNQTFFSMSALPNADVSFQSVMQQNKIESEQDYLDNMW RFAAQGKVAMTLYNNMQQFSHYQLKTNQNDWIEHKAAEYTWELQNGINRFEVRSVSNEGVIGPMTFAEVRYQ >Mature_392_residues MLPSLFKLKVLCIAALLPSTLLANELVKVEVIASNNYQTNMVVAAKEGSFKQDPELVAYVFERAKFKQYQEPQLFIEVMD WVASQWQHDGLNEAPSEMSSLDILKSVHQQGTRYRCVEYGKVMADILSAMGHHSRQIGLQSSDVAYGGWGKGHVATEVWS NDLNKWVFFDPQFSTYAQYEGQYLNIHDMYRLKRQGKFEQISFIVTSNFAKVNDIKQQDNQAGYSQFLTNYFGYHVASQQ IGDKKQSTVLMMEAKEPFLTFQGMGSNRTKLFTKAVEIAYPKMNQTFFSMSALPNADVSFQSVMQQNKIESEQDYLDNMW RFAAQGKVAMTLYNNMQQFSHYQLKTNQNDWIEHKAAEYTWELQNGINRFEVRSVSNEGVIGPMTFAEVRYQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45106; Mature: 45106
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPSLFKLKVLCIAALLPSTLLANELVKVEVIASNNYQTNMVVAAKEGSFKQDPELVAYV CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHH FERAKFKQYQEPQLFIEVMDWVASQWQHDGLNEAPSEMSSLDILKSVHQQGTRYRCVEYG HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH KVMADILSAMGHHSRQIGLQSSDVAYGGWGKGHVATEVWSNDLNKWVFFDPQFSTYAQYE HHHHHHHHHHCCCHHCCCCCCCCCEECCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHCC GQYLNIHDMYRLKRQGKFEQISFIVTSNFAKVNDIKQQDNQAGYSQFLTNYFGYHVASQQ CCEECHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IGDKKQSTVLMMEAKEPFLTFQGMGSNRTKLFTKAVEIAYPKMNQTFFSMSALPNADVSF HCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHH QSVMQQNKIESEQDYLDNMWRFAAQGKVAMTLYNNMQQFSHYQLKTNQNDWIEHKAAEYT HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCEEEECCCCHHHHHHHHHEE WELQNGINRFEVRSVSNEGVIGPMTFAEVRYQ EHHHCCCCEEEEEECCCCCCCCCCCHHHEECC >Mature Secondary Structure MLPSLFKLKVLCIAALLPSTLLANELVKVEVIASNNYQTNMVVAAKEGSFKQDPELVAYV CCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEEEECCCCCCCCHHHHHHH FERAKFKQYQEPQLFIEVMDWVASQWQHDGLNEAPSEMSSLDILKSVHQQGTRYRCVEYG HHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHH KVMADILSAMGHHSRQIGLQSSDVAYGGWGKGHVATEVWSNDLNKWVFFDPQFSTYAQYE HHHHHHHHHHCCCHHCCCCCCCCCEECCCCCCCHHHHHHHCCCCCEEEECCCCCHHHHCC GQYLNIHDMYRLKRQGKFEQISFIVTSNFAKVNDIKQQDNQAGYSQFLTNYFGYHVASQQ CCEECHHHHHHHHHCCCHHHEEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH IGDKKQSTVLMMEAKEPFLTFQGMGSNRTKLFTKAVEIAYPKMNQTFFSMSALPNADVSF HCCCCCCEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCHH QSVMQQNKIESEQDYLDNMWRFAAQGKVAMTLYNNMQQFSHYQLKTNQNDWIEHKAAEYT HHHHHHHCCCCHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCEEEECCCCHHHHHHHHHEE WELQNGINRFEVRSVSNEGVIGPMTFAEVRYQ EHHHCCCCEEEEEECCCCCCCCCCCHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA