| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is norW [H]
Identifier: 157963463
GI number: 157963463
Start: 4440929
End: 4442098
Strand: Reverse
Name: norW [H]
Synonym: Spea_3651
Alternate gene names: 157963463
Gene position: 4442098-4440929 (Counterclockwise)
Preceding gene: 157963464
Following gene: 157963462
Centisome position: 85.84
GC content: 47.69
Gene sequence:
>1170_bases ATGATGAGTGAGCAAATTGATGCGCCAATCGTCATCATTGGTAGTGGCTTTGCCGCTTACCAACTTATTAGAGCCATTCG ACGCAGCGATCAAACCATTAAGATCCAGGTTTTTAGTGCTGATAATGGTGATGATTACAATAAACCAGACTTGAGCCATG TGGTGTCTAAGCAGCAGTTGGCAAGCGATCTTGTGCGTGCATCAGGCGATGAGCTAGCGCGGGAGCTTAACTTTGAGCTG CACGCCAATACCTATGTAGACTCGATTGAGCCAGATCAACATAAGATCATGGTTGCAGGGAAGGTGTATCCATACGCAAA GCTAGTTATTGCAACCGGAGCTAGGGCTTTTGTGCCGCCGCTCTCAGGCAACGCAGTGGATCGCATTGTGACCCTCAATA GTTTGCAAGAGTATCAAGTTGCCGAGCAAGAATTGGCATTGGCCAAGCGAGTGCTGGTAATAGGCGGCGGTTTGATCGGC ACCGAGTTATCTATGGATCTCGCAACAGCAGGCAAGCGAGTTATCACTGTCGATCCTTGCGATCAACTGATGGCTAATTT ACTCCCCGAATACATTGCCACTCAGCTAAGCAAGCAGATGCAGCAAATAGGCGTACAGTTAGCGCTGAATAACAAAGTGA GTAGCATTAGCTCGAGTGAAGATTGTGGAGCTTTTCAGGTAGAGCTGGCAAATGGTGAGTCGCTTATTGTCGATACTGTC ATTTCTGCCGCAGGACTTCAGGCTAACACTCAGCTAGCACTGCAAGCGGGTTTGGCGGTTAAGCGAGGCATAGTGGTGGA TAAGCAAATGCAAACCACGGCAATGGATGTCTATGCCTTAGGCGATTGCGCTGAGATTGGCGGTAAGGTGCTAGCCTATC TGCAGCCAGCTTTAGTTTGTGCCAATGCATTAGCTAAAACCTTGTTAGGCCAATTAACGGCAGTCGTATTGCCTGCCATG TTGGTTAAAGTTAAAACGCCGCTTTATCCTATTCAGTTGGCAGGGCAAGCCGTGCAACAGGTTAATCGCTGGCAATTAGA TATAGATGCACAGGGGACTTGTGTACAAGCATTTGATACTGATGAACAGTTACAAGGTTTTGTGGTTGCAGAGCAGCACA TGAGTAAGGCTTTTGGTTTGCTTAAGCGTTTAGGAAAAGCGCCTGCCTAA
Upstream 100 bases:
>100_bases GTGGCCCCCGGCACCACTTGGTCAGATGTAGCGGAAGATTTTCTGTGCCCAGAATGCGGTATTGGTAAACAAGTGTTTCA ACCCATAGCAGGAGCATAAT
Downstream 100 bases:
>100_bases GATTGAACGAGTTAACTTAAGCATTAATTAGCTTTGTATCAAATAATCTACATTGCGCTTTTGTGCTATCGAAAACCAGA AAGTAGAGAGCAAAAATTAG
Product: nitric oxide reductase
Products: NAD; reduced flavorubredoxin; H2O [C]
Alternate protein names: Flavorubredoxin reductase; FlRd-reductase; FlavoRb reductase [H]
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MMSEQIDAPIVIIGSGFAAYQLIRAIRRSDQTIKIQVFSADNGDDYNKPDLSHVVSKQQLASDLVRASGDELARELNFEL HANTYVDSIEPDQHKIMVAGKVYPYAKLVIATGARAFVPPLSGNAVDRIVTLNSLQEYQVAEQELALAKRVLVIGGGLIG TELSMDLATAGKRVITVDPCDQLMANLLPEYIATQLSKQMQQIGVQLALNNKVSSISSSEDCGAFQVELANGESLIVDTV ISAAGLQANTQLALQAGLAVKRGIVVDKQMQTTAMDVYALGDCAEIGGKVLAYLQPALVCANALAKTLLGQLTAVVLPAM LVKVKTPLYPIQLAGQAVQQVNRWQLDIDAQGTCVQAFDTDEQLQGFVVAEQHMSKAFGLLKRLGKAPA
Sequences:
>Translated_389_residues MMSEQIDAPIVIIGSGFAAYQLIRAIRRSDQTIKIQVFSADNGDDYNKPDLSHVVSKQQLASDLVRASGDELARELNFEL HANTYVDSIEPDQHKIMVAGKVYPYAKLVIATGARAFVPPLSGNAVDRIVTLNSLQEYQVAEQELALAKRVLVIGGGLIG TELSMDLATAGKRVITVDPCDQLMANLLPEYIATQLSKQMQQIGVQLALNNKVSSISSSEDCGAFQVELANGESLIVDTV ISAAGLQANTQLALQAGLAVKRGIVVDKQMQTTAMDVYALGDCAEIGGKVLAYLQPALVCANALAKTLLGQLTAVVLPAM LVKVKTPLYPIQLAGQAVQQVNRWQLDIDAQGTCVQAFDTDEQLQGFVVAEQHMSKAFGLLKRLGKAPA >Mature_389_residues MMSEQIDAPIVIIGSGFAAYQLIRAIRRSDQTIKIQVFSADNGDDYNKPDLSHVVSKQQLASDLVRASGDELARELNFEL HANTYVDSIEPDQHKIMVAGKVYPYAKLVIATGARAFVPPLSGNAVDRIVTLNSLQEYQVAEQELALAKRVLVIGGGLIG TELSMDLATAGKRVITVDPCDQLMANLLPEYIATQLSKQMQQIGVQLALNNKVSSISSSEDCGAFQVELANGESLIVDTV ISAAGLQANTQLALQAGLAVKRGIVVDKQMQTTAMDVYALGDCAEIGGKVLAYLQPALVCANALAKTLLGQLTAVVLPAM LVKVKTPLYPIQLAGQAVQQVNRWQLDIDAQGTCVQAFDTDEQLQGFVVAEQHMSKAFGLLKRLGKAPA
Specific function: One of at least two accessory proteins for anaerobic nitric oxide (NO) reductase. Reduces the rubredoxin moiety of NO reductase [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FAD-dependent oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI4757732, Length=226, Percent_Identity=25.6637168141593, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI22202629, Length=226, Percent_Identity=25.6637168141593, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI65787454, Length=279, Percent_Identity=24.3727598566308, Blast_Score=65, Evalue=7e-11, Organism=Homo sapiens, GI226437568, Length=279, Percent_Identity=24.3727598566308, Blast_Score=65, Evalue=8e-11, Organism=Homo sapiens, GI21389617, Length=279, Percent_Identity=24.3727598566308, Blast_Score=65, Evalue=9e-11, Organism=Escherichia coli, GI1789065, Length=375, Percent_Identity=45.8666666666667, Blast_Score=339, Evalue=1e-94, Organism=Escherichia coli, GI1788892, Length=279, Percent_Identity=29.0322580645161, Blast_Score=101, Evalue=7e-23, Organism=Escherichia coli, GI1789765, Length=326, Percent_Identity=26.0736196319018, Blast_Score=87, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17559934, Length=286, Percent_Identity=24.1258741258741, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24639257, Length=278, Percent_Identity=22.6618705035971, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI281359715, Length=278, Percent_Identity=22.6618705035971, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI281359713, Length=278, Percent_Identity=22.6618705035971, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24639250, Length=278, Percent_Identity=22.6618705035971, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI18543267, Length=278, Percent_Identity=22.6618705035971, Blast_Score=72, Evalue=9e-13, Organism=Drosophila melanogaster, GI24639252, Length=278, Percent_Identity=22.6618705035971, Blast_Score=72, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013027 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 41675; Mature: 41675
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSEQIDAPIVIIGSGFAAYQLIRAIRRSDQTIKIQVFSADNGDDYNKPDLSHVVSKQQL CCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH ASDLVRASGDELARELNFELHANTYVDSIEPDQHKIMVAGKVYPYAKLVIATGARAFVPP HHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCHHEEEEECCCCCCCCC LSGNAVDRIVTLNSLQEYQVAEQELALAKRVLVIGGGLIGTELSMDLATAGKRVITVDPC CCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCEEEEECCH DQLMANLLPEYIATQLSKQMQQIGVQLALNNKVSSISSSEDCGAFQVELANGESLIVDTV HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHCCCCCCCCCEEEEEECCCCEEHHHHH ISAAGLQANTQLALQAGLAVKRGIVVDKQMQTTAMDVYALGDCAEIGGKVLAYLQPALVC HHHCCCCCCCHHHHHHCHHHHCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ANALAKTLLGQLTAVVLPAMLVKVKTPLYPIQLAGQAVQQVNRWQLDIDAQGTCVQAFDT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEECCCCCEEEECCC DEQLQGFVVAEQHMSKAFGLLKRLGKAPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMSEQIDAPIVIIGSGFAAYQLIRAIRRSDQTIKIQVFSADNGDDYNKPDLSHVVSKQQL CCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHH ASDLVRASGDELARELNFELHANTYVDSIEPDQHKIMVAGKVYPYAKLVIATGARAFVPP HHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCCEEEEEECCCCHHEEEEECCCCCCCCC LSGNAVDRIVTLNSLQEYQVAEQELALAKRVLVIGGGLIGTELSMDLATAGKRVITVDPC CCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHCCCCEECCHHHHHHHHCCCEEEEECCH DQLMANLLPEYIATQLSKQMQQIGVQLALNNKVSSISSSEDCGAFQVELANGESLIVDTV HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHCCCCCCCCCEEEEEECCCCEEHHHHH ISAAGLQANTQLALQAGLAVKRGIVVDKQMQTTAMDVYALGDCAEIGGKVLAYLQPALVC HHHCCCCCCCHHHHHHCHHHHCCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH ANALAKTLLGQLTAVVLPAMLVKVKTPLYPIQLAGQAVQQVNRWQLDIDAQGTCVQAFDT HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEECCCCCEEEECCC DEQLQGFVVAEQHMSKAFGLLKRLGKAPA HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; oxidized flavorubredoxin; O2 [C]
Specific reaction: NADH + oxidized flavorubredoxin + O2 = NAD + reduced flavorubredoxin + H2O [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA