| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963449
Identifier: 157963449
GI number: 157963449
Start: 4427213
End: 4427536
Strand: Reverse
Name: 157963449
Synonym: Spea_3637
Alternate gene names: NA
Gene position: 4427536-4427213 (Counterclockwise)
Preceding gene: 157963450
Following gene: 157963444
Centisome position: 85.56
GC content: 44.44
Gene sequence:
>324_bases ATGGCTGTACTGGCATTAGGTTTTATGATTATGTTTCTGGGATTAGCCTTTATGGGCTTGCCAGAGCTTAACCGAGTGTT AAAGCTGCATGATAGAGCGCTATGGGATTCTTTGCAGGGATCTAAAGCTAGTTTTATCTCCTCTTTTGATCGTATGACGC TATTTAGCTGGACGCTGAGCCGAGGGTTTGAAAACTCTGAGAACATAGATATTCAGTACGCTGGTTTGCTGGCCTATAAA CGTGCTACCCGGGTAAAGTACATCATCTTAGCGGGGATCTCTCTGATTATCATAGGTTCGATTAGTGCGCTGACAGGCCT GTAA
Upstream 100 bases:
>100_bases AGTCAAAGGAGCTGAGGAAGTCGTGCGATAACCAATGTCGGCTTTACATCTGTCGAAAAATATCCGATGTTAGAAGAGTA TTTCGTCAAGGGAGGACGTT
Downstream 100 bases:
>100_bases TATAAATTCGTCTCTAATATCTATTGGCCTCTAATACCTTAAATCACAGAAAACAAAAAAGCCGCCAACACTCATGTGTT GGCGGCTTTCTATTAAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 107; Mature: 106
Protein sequence:
>107_residues MAVLALGFMIMFLGLAFMGLPELNRVLKLHDRALWDSLQGSKASFISSFDRMTLFSWTLSRGFENSENIDIQYAGLLAYK RATRVKYIILAGISLIIIGSISALTGL
Sequences:
>Translated_107_residues MAVLALGFMIMFLGLAFMGLPELNRVLKLHDRALWDSLQGSKASFISSFDRMTLFSWTLSRGFENSENIDIQYAGLLAYK RATRVKYIILAGISLIIIGSISALTGL >Mature_106_residues AVLALGFMIMFLGLAFMGLPELNRVLKLHDRALWDSLQGSKASFISSFDRMTLFSWTLSRGFENSENIDIQYAGLLAYKR ATRVKYIILAGISLIIIGSISALTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11862; Mature: 11731
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVLALGFMIMFLGLAFMGLPELNRVLKLHDRALWDSLQGSKASFISSFDRMTLFSWTLS CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RGFENSENIDIQYAGLLAYKRATRVKYIILAGISLIIIGSISALTGL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AVLALGFMIMFLGLAFMGLPELNRVLKLHDRALWDSLQGSKASFISSFDRMTLFSWTLS HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH RGFENSENIDIQYAGLLAYKRATRVKYIILAGISLIIIGSISALTGL CCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA