| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is mlaE [H]
Identifier: 157963422
GI number: 157963422
Start: 4400813
End: 4401598
Strand: Reverse
Name: mlaE [H]
Synonym: Spea_3608
Alternate gene names: 157963422
Gene position: 4401598-4400813 (Counterclockwise)
Preceding gene: 157963423
Following gene: 157963421
Centisome position: 85.06
GC content: 49.75
Gene sequence:
>786_bases GTGAGCTTGATTGATCATATTGCTCGACTAGGTCGGGCTGCAATTGAGTTAGTTATTGGGCTAGGACAAGCCGGTCTAAT GCTGTGGGGCGCCATTGTGCATCGCCCAAGATTTCGTAAAGGTACGCCGTTACTGCTAAAGCAGCTGTATGTTATTGGAG TACAGTCTATGGTGATCATCATAGTCTCTGGGCTGTTTATCGGCATGGTGCTGGCGCTACAAGGCTATAATATCTTAGTA GGCTTTGGCACTGAGGAGAGCCTGGGCCCCATGGTTGCCCTGAGCTTATTGCGAGAGTTAGGCCCTGTGGTCACCGCACT GCTATTCGCCGGCCGCGCAGGTTCTGCGTTAACGGCTGAGCTCGGCCTAATGAAGAGTACCGAGCAGTTATCTAGTCTAG AGATGATGGCTATTGACCCATTGAGGCAGATTATTGCGCCACGCTTTTGGGCTGGTGTTATCAGTTTGCCACTGCTGGCG CTGATGTTTACCGCAGTCGGGATCTACGGTGGTCACCTTGTTGGTGTCGAGTGGAAAGGCATTGATAGCGGTAGCTTCTG GTCAATACTTCAGGCATCTGTTGAGTGGCGAGAAGATATCGTTAACTGCATTATCAAGAGTTTGTTATTTGCTGTGGTGG TGACATGGATTGCGCTTTATCGAGGCTATCATGTGATCCCGAACCCTGAAGGGATTAGCAGGGCAACGACCCAGACGGTT GTGCAGTCAAGTTTAGCCGTTTTAGCATTAGACTTCTTATTGACAGCGGTAATGTTTGGTAGTTAG
Upstream 100 bases:
>100_bases TTATCAGATAATCCGCAATTAAAGCAATTTATTGGTGGTGAGCCTGACGGTCCAGTACCGTTTCATTATCCTGCACAAGA TTACAAGAAGGAACTTATCG
Downstream 100 bases:
>100_bases TCGATATGACGAGTGTACATACCTAGTCGTTAATTATTATTTAGATTTATTGAATAGAGTGGTAAATAAGTTATGTTGAC AAGGAAAATTGAGATTCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSLIDHIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVIIIVSGLFIGMVLALQGYNILV GFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLA LMFTAVGIYGGHLVGVEWKGIDSGSFWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTV VQSSLAVLALDFLLTAVMFGS
Sequences:
>Translated_261_residues MSLIDHIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVIIIVSGLFIGMVLALQGYNILV GFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLA LMFTAVGIYGGHLVGVEWKGIDSGSFWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTV VQSSLAVLALDFLLTAVMFGS >Mature_260_residues SLIDHIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVIIIVSGLFIGMVLALQGYNILVG FGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAELGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLAL MFTAVGIYGGHLVGVEWKGIDSGSFWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTVV QSSLAVLALDFLLTAVMFGS
Specific function: Part of the ABC transporter complex mlaFEDB that actively prevents phospholipid accumulation at the cell surface. Probably maintains lipid asymmetry in the outer membrane by retrograde trafficking of phospholipids from the outer membrane to the inner memb
COG id: COG0767
COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mlaE permease family [H]
Homologues:
Organism=Escherichia coli, GI1789585, Length=259, Percent_Identity=67.1814671814672, Blast_Score=356, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003453 [H]
Pfam domain/function: PF02405 DUF140 [H]
EC number: NA
Molecular weight: Translated: 28114; Mature: 27983
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIDHIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVII CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH IVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAE HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC IDSGSFWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VQSSLAVLALDFLLTAVMFGS HHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLIDHIARLGRAAIELVIGLGQAGLMLWGAIVHRPRFRKGTPLLLKQLYVIGVQSMVII CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH IVSGLFIGMVLALQGYNILVGFGTEESLGPMVALSLLRELGPVVTALLFAGRAGSALTAE HHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH LGLMKSTEQLSSLEMMAIDPLRQIIAPRFWAGVISLPLLALMFTAVGIYGGHLVGVEWKG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECC IDSGSFWSILQASVEWREDIVNCIIKSLLFAVVVTWIALYRGYHVIPNPEGISRATTQTV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH VQSSLAVLALDFLLTAVMFGS HHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]