| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is icc [H]
Identifier: 157963374
GI number: 157963374
Start: 4348283
End: 4349122
Strand: Reverse
Name: icc [H]
Synonym: Spea_3560
Alternate gene names: 157963374
Gene position: 4349122-4348283 (Counterclockwise)
Preceding gene: 157963375
Following gene: 157963373
Centisome position: 84.05
GC content: 46.31
Gene sequence:
>840_bases TTGTTGAAAGCGGCTATCTCTTATTCAATTTCTGAAGTCGAGAGTGTGAGAATCGTGCAAGTCACAGATCCTCACTTGTT TGCCGATCCCGAAGCCCAGCTATTAGGTGTTAATACGGCTAATAGTCTAGGCGCTGTGTTAAATACCATCTCTGCAGTTA ATTACCCTGCACACTTAATGCTAGCAACCGGTGATATTAGCCAAGATTACTCAAACGAGTCATATCACAGCTTTGTTAAA GCTATTGAGCCTGTTAACTTACCTTGTCATTACTTACCCGGTAACCATGATGACCCGCGCATCATGAATCTACATATGCA AGGGCCCAAGATTTTTGCTCAAAAGCGTATCTTGGCGGGAAATTGGCAGATTATTATGTTGGATTCGACTGTAAGAGAGC GCCCTGGCGGACATATGTCTGAAGCGGAACTTGAGCTTATCGACAGTTCGATAAAAGCAGAACCAGGCCGTAATGTACTG CTGGTGATGCACCACAACCCAGTTCTAACAGGGTGTAATTGGCTGGATCAGCATTGCATGGATAATGGTGCAAGCTTTAT AGAGAGAGTCGCCCAGTACCCACAAGTAAAGGGCTTGCTCTGGGGCCACGTTCACCAAAGTATAGACACTAAACACATGG GGCCACATGGAGCGCTGCATTTGATGGCAACACCGTCAACCTGCATTCAGTTTAAGCCTAAGTCGCCCTATTTTGCGCTC GACGCACTGCAACCTGGCTATCGTTTGCTGGAGCTGAAGTCTGATGGTAGCATTCTGACTAATGTTTACCGGGTGCCGGG TGAAACATTTTCACCAGATAAAGATGCAGGCGGTTATTAG
Upstream 100 bases:
>100_bases TCGGGATGAAAAGTACCAAGTCAATGCTTTTCTAGAAGAGTTATTGAAGATAGATAACTTAACTAAGTTCGTCAGTTAAT CTGATTATTAGGTAATTAAT
Downstream 100 bases:
>100_bases CTAACAGAAACCGCAGTGTGAGGAAGTATGCTGCTATATATACATGGATTTAATAGTTCACCCCTTTCAGATAAAGGTTT AGTCACCGCGCGCTTCATGG
Product: calcineurin phosphoesterase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MLKAAISYSISEVESVRIVQVTDPHLFADPEAQLLGVNTANSLGAVLNTISAVNYPAHLMLATGDISQDYSNESYHSFVK AIEPVNLPCHYLPGNHDDPRIMNLHMQGPKIFAQKRILAGNWQIIMLDSTVRERPGGHMSEAELELIDSSIKAEPGRNVL LVMHHNPVLTGCNWLDQHCMDNGASFIERVAQYPQVKGLLWGHVHQSIDTKHMGPHGALHLMATPSTCIQFKPKSPYFAL DALQPGYRLLELKSDGSILTNVYRVPGETFSPDKDAGGY
Sequences:
>Translated_279_residues MLKAAISYSISEVESVRIVQVTDPHLFADPEAQLLGVNTANSLGAVLNTISAVNYPAHLMLATGDISQDYSNESYHSFVK AIEPVNLPCHYLPGNHDDPRIMNLHMQGPKIFAQKRILAGNWQIIMLDSTVRERPGGHMSEAELELIDSSIKAEPGRNVL LVMHHNPVLTGCNWLDQHCMDNGASFIERVAQYPQVKGLLWGHVHQSIDTKHMGPHGALHLMATPSTCIQFKPKSPYFAL DALQPGYRLLELKSDGSILTNVYRVPGETFSPDKDAGGY >Mature_279_residues MLKAAISYSISEVESVRIVQVTDPHLFADPEAQLLGVNTANSLGAVLNTISAVNYPAHLMLATGDISQDYSNESYHSFVK AIEPVNLPCHYLPGNHDDPRIMNLHMQGPKIFAQKRILAGNWQIIMLDSTVRERPGGHMSEAELELIDSSIKAEPGRNVL LVMHHNPVLTGCNWLDQHCMDNGASFIERVAQYPQVKGLLWGHVHQSIDTKHMGPHGALHLMATPSTCIQFKPKSPYFAL DALQPGYRLLELKSDGSILTNVYRVPGETFSPDKDAGGY
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli icc [H]
Homologues:
Organism=Escherichia coli, GI1789410, Length=279, Percent_Identity=41.5770609318996, Blast_Score=212, Evalue=2e-56,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 30786; Mature: 30786
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKAAISYSISEVESVRIVQVTDPHLFADPEAQLLGVNTANSLGAVLNTISAVNYPAHLM CCCHHHHHCHHCCCEEEEEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCEEEE LATGDISQDYSNESYHSFVKAIEPVNLPCHYLPGNHDDPRIMNLHMQGPKIFAQKRILAG EEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEECCCHHHHHCEEEEC NWQIIMLDSTVRERPGGHMSEAELELIDSSIKAEPGRNVLLVMHHNPVLTGCNWLDQHCM CEEEEEECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCHHHHHHHH DNGASFIERVAQYPQVKGLLWGHVHQSIDTKHMGPHGALHLMATPSTCIQFKPKSPYFAL CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCEEE DALQPGYRLLELKSDGSILTNVYRVPGETFSPDKDAGGY ECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC >Mature Secondary Structure MLKAAISYSISEVESVRIVQVTDPHLFADPEAQLLGVNTANSLGAVLNTISAVNYPAHLM CCCHHHHHCHHCCCEEEEEEEECCCEEECCCCEEEECCCCHHHHHHHHHHHHCCCCEEEE LATGDISQDYSNESYHSFVKAIEPVNLPCHYLPGNHDDPRIMNLHMQGPKIFAQKRILAG EEECCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEEEEEECCCHHHHHCEEEEC NWQIIMLDSTVRERPGGHMSEAELELIDSSIKAEPGRNVLLVMHHNPVLTGCNWLDQHCM CEEEEEECCHHHHCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCHHHHHHHH DNGASFIERVAQYPQVKGLLWGHVHQSIDTKHMGPHGALHLMATPSTCIQFKPKSPYFAL CCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEECCCCCCEEE DALQPGYRLLELKSDGSILTNVYRVPGETFSPDKDAGGY ECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]