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The map label for this gene is petA [H]

Identifier: 157963350

GI number: 157963350

Start: 4319238

End: 4319879

Strand: Reverse

Name: petA [H]

Synonym: Spea_3536

Alternate gene names: 157963350

Gene position: 4319879-4319238 (Counterclockwise)

Preceding gene: 157963351

Following gene: 157963349

Centisome position: 83.48

GC content: 48.75

Gene sequence:

>642_bases
ATGAAGAAGATAGATAAAACAAAAATTCCAACACTCTCTGGAGACAAGTGGATGAGCAATGCGCCAGTCGATACCGGACG
TCGCAGATTTCTGACCGCAGCCACCGCCGTAGTTGGTGGTGCTGGTGCCGCTGCTGTAGCGGTTCCGTTTATAAAGTCAT
GGAATCCGAGTGCCAAAGCGAAAGCTGCAGGTGCGCCGGTTGAAGTAAACATAAGTAAAGTAGAGCCAGGTCAACTTATT
CGAGTTGAATGGCGTGGTAAACCTGTATGGGTTGTTCGTCGCACGCAGGAGATCTTGGATGGTCTACCAGCAATTGATGC
ACAGCTTCGCGATCCTGATTCAGTTGAGCCGCAGCAACCTGCATATGCGCAGAACCCTGGGCGTTCAATTAAAGCTGAGT
ACTTCATTGCCGTTGGCTTATGTACTCACTTGGGTTGTTCTCCAACTTACTTACCAGACACATTTGGTGAACAAGTTGAA
GGTGTTGCGTCAGGATTCTTCTGCCCATGTCACGGCTCAAAGTTTGATATGGCTGGTCGCGTATTCCAAGGTGTACCTGC
GCCGTTAAACCTAGTCATCCCTCCACATCAATATCTTGATGATAGCACCGTGCTTATCGGTGTTGATAAAGGAGCTGCGT
AA

Upstream 100 bases:

>100_bases
AGTTAACTAAGTTGAGTGTTTTAACTATGATCTGGTTCTAATTTTTGGCTATAATGGGCTCCGTCTCAAACTTGGATTCA
AATTCCGGTTTGAATCAGTT

Downstream 100 bases:

>100_bases
TGGTTAAGAATATTATCAGCTGGATTGATGAGCGCATTCCAATGACCGCTACGTATAATCGTCATGTAGGTCAGTATGCG
ACACCAACCAACTTCAACTT

Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKKIDKTKIPTLSGDKWMSNAPVDTGRRRFLTAATAVVGGAGAAAVAVPFIKSWNPSAKAKAAGAPVEVNISKVEPGQLI
RVEWRGKPVWVVRRTQEILDGLPAIDAQLRDPDSVEPQQPAYAQNPGRSIKAEYFIAVGLCTHLGCSPTYLPDTFGEQVE
GVASGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPPHQYLDDSTVLIGVDKGAA

Sequences:

>Translated_213_residues
MKKIDKTKIPTLSGDKWMSNAPVDTGRRRFLTAATAVVGGAGAAAVAVPFIKSWNPSAKAKAAGAPVEVNISKVEPGQLI
RVEWRGKPVWVVRRTQEILDGLPAIDAQLRDPDSVEPQQPAYAQNPGRSIKAEYFIAVGLCTHLGCSPTYLPDTFGEQVE
GVASGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPPHQYLDDSTVLIGVDKGAA
>Mature_213_residues
MKKIDKTKIPTLSGDKWMSNAPVDTGRRRFLTAATAVVGGAGAAAVAVPFIKSWNPSAKAKAAGAPVEVNISKVEPGQLI
RVEWRGKPVWVVRRTQEILDGLPAIDAQLRDPDSVEPQQPAYAQNPGRSIKAEYFIAVGLCTHLGCSPTYLPDTFGEQVE
GVASGFFCPCHGSKFDMAGRVFQGVPAPLNLVIPPHQYLDDSTVLIGVDKGAA

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=180, Percent_Identity=37.2222222222222, Blast_Score=114, Evalue=6e-26,
Organism=Caenorhabditis elegans, GI17540418, Length=180, Percent_Identity=35.5555555555556, Blast_Score=101, Evalue=3e-22,
Organism=Saccharomyces cerevisiae, GI6320811, Length=196, Percent_Identity=34.6938775510204, Blast_Score=110, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24580896, Length=159, Percent_Identity=35.2201257861635, Blast_Score=103, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 22706; Mature: 22706

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIDKTKIPTLSGDKWMSNAPVDTGRRRFLTAATAVVGGAGAAAVAVPFIKSWNPSAKA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
KAAGAPVEVNISKVEPGQLIRVEWRGKPVWVVRRTQEILDGLPAIDAQLRDPDSVEPQQP
CCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCC
AYAQNPGRSIKAEYFIAVGLCTHLGCSPTYLPDTFGEQVEGVASGFFCPCHGSKFDMAGR
CCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCH
VFQGVPAPLNLVIPPHQYLDDSTVLIGVDKGAA
HHHCCCCCEEEEECCHHHCCCCEEEEEECCCCC
>Mature Secondary Structure
MKKIDKTKIPTLSGDKWMSNAPVDTGRRRFLTAATAVVGGAGAAAVAVPFIKSWNPSAKA
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCC
KAAGAPVEVNISKVEPGQLIRVEWRGKPVWVVRRTQEILDGLPAIDAQLRDPDSVEPQQP
CCCCCCEEEEEEEECCCCEEEEEECCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCCCC
AYAQNPGRSIKAEYFIAVGLCTHLGCSPTYLPDTFGEQVEGVASGFFCPCHGSKFDMAGR
CCCCCCCCCCEEEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCH
VFQGVPAPLNLVIPPHQYLDDSTVLIGVDKGAA
HHHCCCCCEEEEECCHHHCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA