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The map label for this gene is petB [H]

Identifier: 157963349

GI number: 157963349

Start: 4318024

End: 4319238

Strand: Reverse

Name: petB [H]

Synonym: Spea_3535

Alternate gene names: 157963349

Gene position: 4319238-4318024 (Counterclockwise)

Preceding gene: 157963350

Following gene: 157963348

Centisome position: 83.47

GC content: 44.36

Gene sequence:

>1215_bases
ATGGTTAAGAATATTATCAGCTGGATTGATGAGCGCATTCCAATGACCGCTACGTATAATCGTCATGTAGGTCAGTATGC
GACACCAACCAACTTCAACTTCTGGTACTTCTTTGGCTCACTAGCCATGTTAGTACTGGTAAACCAGTTGCTGACAGGTA
TCTGGTTAACAATGAACTACGTACCTACAGCAGAAGGTGCGTTTGCTTCTATTGAATATATTATGCGTGATGTTGAGTAC
GGTTGGTTGCTGCGGTATATGCACTCCACCGGAGCCTCAGCCTTCTTTGTGGTGATCTATCTTCATATGTTCCGTGGTCT
AATCTACGGTTCATACCAGAAGCCTAGAGAGTTGTTGTGGTTATTTGGTATGCTCATCTTCCTTGTGTTGATGGCAGAAG
CCTTTATGGGTTACCTACTACCTTGGGGACAGATGTCTTACTGGGGCGCACAGGTAATTATCTCCTTGTTTGGTGCAATT
CCTGTTATCGGTGATGACCTAACGCTGTGGATCCGAGGTGACTTCGTTGTTTCGGGGGCGACTCTAAACCGCTTCTTCGC
ATTGCATGTTATTGCTCTGCCGCTTGTGCTTGTTGTTTTAGTGTTCTTACACTTAATCGCACTGCATGAAGTGGGCTCTA
ACAACCCTGACGGTATCGAGATTAAGCAGAACAAAGATGAGAATGGCTGGCCAAAAGATGGTATTCCATTCCACCCATAC
TACACAGTTAAAGACATCATGGGCGTCGCAGGCTTCCTAATTGTCTTCTGTTATGTATTGTTCTTTATGCCTGAAGGTGG
CGGTTACTTCCTCGAGAAGCCGAATTTTGAAGCGGCTAACCCAATGAAGACACCTGAGCATATTGCACCTGTTTGGTATT
TCACACCTTTCTATGCAATTTTACGTGCTATCCCAGACAAATTAATGGGTGTTATCGGCATGGGCTTAGCTATTGCAGTG
CTGTTTGTATTGCCATGGTTAGATCGTTGTAAGGTTAAGTCAATTCGCTACCGTAGCATGACTCACAAGCTGAACATTTC
TCAGTTTGCAGTTTCGTTCTTGGTACTGGGTTACTTAGGTGCGGTGCCTGCTACTCCGGCGCTAACAATAGCAGCACGTA
TCTTCACTCTAACTTACTTTGGTTTCTTCTTATTCCTATGGATTTACAGTAAGAATGAAAAGACTAAGCCAGTACCAGAG
AGGTTGACACACTAA

Upstream 100 bases:

>100_bases
TATTCCAAGGTGTACCTGCGCCGTTAAACCTAGTCATCCCTCCACATCAATATCTTGATGATAGCACCGTGCTTATCGGT
GTTGATAAAGGAGCTGCGTA

Downstream 100 bases:

>100_bases
TGAAAAAATTACTGATTGCATTAGTTGCATTGGTGCCAACTCTGGCTATTGCAGCCGGAGGTGGAGCACCTCTAGAGAAG
GCCAATATTGATCTAAACGA

Product: cytochrome b/b6 domain-containing protein

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MVKNIISWIDERIPMTATYNRHVGQYATPTNFNFWYFFGSLAMLVLVNQLLTGIWLTMNYVPTAEGAFASIEYIMRDVEY
GWLLRYMHSTGASAFFVVIYLHMFRGLIYGSYQKPRELLWLFGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAI
PVIGDDLTLWIRGDFVVSGATLNRFFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKQNKDENGWPKDGIPFHPY
YTVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEHIAPVWYFTPFYAILRAIPDKLMGVIGMGLAIAV
LFVLPWLDRCKVKSIRYRSMTHKLNISQFAVSFLVLGYLGAVPATPALTIAARIFTLTYFGFFLFLWIYSKNEKTKPVPE
RLTH

Sequences:

>Translated_404_residues
MVKNIISWIDERIPMTATYNRHVGQYATPTNFNFWYFFGSLAMLVLVNQLLTGIWLTMNYVPTAEGAFASIEYIMRDVEY
GWLLRYMHSTGASAFFVVIYLHMFRGLIYGSYQKPRELLWLFGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAI
PVIGDDLTLWIRGDFVVSGATLNRFFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKQNKDENGWPKDGIPFHPY
YTVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEHIAPVWYFTPFYAILRAIPDKLMGVIGMGLAIAV
LFVLPWLDRCKVKSIRYRSMTHKLNISQFAVSFLVLGYLGAVPATPALTIAARIFTLTYFGFFLFLWIYSKNEKTKPVPE
RLTH
>Mature_404_residues
MVKNIISWIDERIPMTATYNRHVGQYATPTNFNFWYFFGSLAMLVLVNQLLTGIWLTMNYVPTAEGAFASIEYIMRDVEY
GWLLRYMHSTGASAFFVVIYLHMFRGLIYGSYQKPRELLWLFGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAI
PVIGDDLTLWIRGDFVVSGATLNRFFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKQNKDENGWPKDGIPFHPY
YTVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEHIAPVWYFTPFYAILRAIPDKLMGVIGMGLAIAV
LFVLPWLDRCKVKSIRYRSMTHKLNISQFAVSFLVLGYLGAVPATPALTIAARIFTLTYFGFFLFLWIYSKNEKTKPVPE
RLTH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=373, Percent_Identity=42.8954423592493, Blast_Score=274, Evalue=1e-73,
Organism=Saccharomyces cerevisiae, GI6226529, Length=367, Percent_Identity=43.3242506811989, Blast_Score=276, Evalue=3e-75,
Organism=Saccharomyces cerevisiae, GI6226532, Length=249, Percent_Identity=44.1767068273092, Blast_Score=205, Evalue=1e-53,
Organism=Saccharomyces cerevisiae, GI6226531, Length=156, Percent_Identity=48.7179487179487, Blast_Score=150, Evalue=3e-37,
Organism=Saccharomyces cerevisiae, GI6226530, Length=145, Percent_Identity=46.2068965517241, Blast_Score=124, Evalue=2e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 46116; Mature: 46116

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKNIISWIDERIPMTATYNRHVGQYATPTNFNFWYFFGSLAMLVLVNQLLTGIWLTMNY
CHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPTAEGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVIYLHMFRGLIYGSYQKPRELLW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LFGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDFVVSGA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCCEEEEEECCEEEECH
TLNRFFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKQNKDENGWPKDGIPFHPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
YTVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEHIAPVWYFTPFYAI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHCHHHHHHHHHHH
LRAIPDKLMGVIGMGLAIAVLFVLPWLDRCKVKSIRYRSMTHKLNISQFAVSFLVLGYLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AVPATPALTIAARIFTLTYFGFFLFLWIYSKNEKTKPVPERLTH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC
>Mature Secondary Structure
MVKNIISWIDERIPMTATYNRHVGQYATPTNFNFWYFFGSLAMLVLVNQLLTGIWLTMNY
CHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VPTAEGAFASIEYIMRDVEYGWLLRYMHSTGASAFFVVIYLHMFRGLIYGSYQKPRELLW
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHH
LFGMLIFLVLMAEAFMGYLLPWGQMSYWGAQVIISLFGAIPVIGDDLTLWIRGDFVVSGA
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEECCCEEEEEECCEEEECH
TLNRFFALHVIALPLVLVVLVFLHLIALHEVGSNNPDGIEIKQNKDENGWPKDGIPFHPY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCC
YTVKDIMGVAGFLIVFCYVLFFMPEGGGYFLEKPNFEAANPMKTPEHIAPVWYFTPFYAI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHCHHHHHHHHHHH
LRAIPDKLMGVIGMGLAIAVLFVLPWLDRCKVKSIRYRSMTHKLNISQFAVSFLVLGYLG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AVPATPALTIAARIFTLTYFGFFLFLWIYSKNEKTKPVPERLTH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA