| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963290
Identifier: 157963290
GI number: 157963290
Start: 4246047
End: 4246826
Strand: Reverse
Name: 157963290
Synonym: Spea_3476
Alternate gene names: NA
Gene position: 4246826-4246047 (Counterclockwise)
Preceding gene: 157963291
Following gene: 157963289
Centisome position: 82.07
GC content: 45.13
Gene sequence:
>780_bases ATGTGGTTTGTTCTATGCATCAGTAAGTTTATTGTTTATCGGCTCGAGCTCATTATGAATTATCTCAAACAGACAAGCCG CTACACTAACTTCAACGATAGCTTAACCGGCATGACGATCTTTAACGATCTCTCGATAAGGGGGCTTATCGCCAACAAGA AAACGAAGCGCCGTCTCAGCCATGACTTTCCCGTCTACTGGATAGTATTACTCTGCCTACTGCTGTTTATCAATGATGCC ATAGCAGAGCCAAACTTTGAGCCAGAGTTTGAGTCAGCGTTTGAGGCTGAGTCAATTACGCTGACTAAGATAAAGAGCTC ATTGGTGAAAGCCGAGCAAAGCGTCAGCCTGATCATCGTCGATAGTTCGCTAGAGCAGCTCGAGGCGTTATTGTCAGGCT TTAGTGGGGAGGTGCATCTGCTTATTCTAGAAGACAATATGGAGCCATTTGAGCAGATAAATCAGGCGCTATACCAAGAG CCGCCTTACTCGAATGTGAGTATTGTCGCTAAGGCCTCAAGCTCAGCAATCTACCTAGGCGGGCGCTGGATTGATAAACA TTACTTACTTGAACATCAACATAGTTTAGCGACTTTTTCCCGCCAGTTTGCTAACGGAAGCCCGCTTTCGCTATATACCA CTAACTTGACTGCAAGCCATGGTGGAGGCCAATTTATAGGTTTATTTGAAGAGCTGACGCAGATGAATGTGGATGTTATT TATATGCAGGGCCAGCACTACGATCCGCTATGGGTACAGCGAGAGCAATATGATTTTTAA
Upstream 100 bases:
>100_bases CAGAGCTGGACGGGATTTAAAAAGGTAACCACAAGCGAAATGAGACGTTATTAACTAATTGAATCCAAATGTGAAAGCCA ATTTCATTTTTGCTATACCG
Downstream 100 bases:
>100_bases GTTTGATCTTTTATTTTTACCTCAATGCTCCATCCAGTTGTTGCATTGAAGATTACCTCTTTTCATAAAGAACTTAATAA AGCGCCTAATACAGAATCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MWFVLCISKFIVYRLELIMNYLKQTSRYTNFNDSLTGMTIFNDLSIRGLIANKKTKRRLSHDFPVYWIVLLCLLLFINDA IAEPNFEPEFESAFEAESITLTKIKSSLVKAEQSVSLIIVDSSLEQLEALLSGFSGEVHLLILEDNMEPFEQINQALYQE PPYSNVSIVAKASSSAIYLGGRWIDKHYLLEHQHSLATFSRQFANGSPLSLYTTNLTASHGGGQFIGLFEELTQMNVDVI YMQGQHYDPLWVQREQYDF
Sequences:
>Translated_259_residues MWFVLCISKFIVYRLELIMNYLKQTSRYTNFNDSLTGMTIFNDLSIRGLIANKKTKRRLSHDFPVYWIVLLCLLLFINDA IAEPNFEPEFESAFEAESITLTKIKSSLVKAEQSVSLIIVDSSLEQLEALLSGFSGEVHLLILEDNMEPFEQINQALYQE PPYSNVSIVAKASSSAIYLGGRWIDKHYLLEHQHSLATFSRQFANGSPLSLYTTNLTASHGGGQFIGLFEELTQMNVDVI YMQGQHYDPLWVQREQYDF >Mature_259_residues MWFVLCISKFIVYRLELIMNYLKQTSRYTNFNDSLTGMTIFNDLSIRGLIANKKTKRRLSHDFPVYWIVLLCLLLFINDA IAEPNFEPEFESAFEAESITLTKIKSSLVKAEQSVSLIIVDSSLEQLEALLSGFSGEVHLLILEDNMEPFEQINQALYQE PPYSNVSIVAKASSSAIYLGGRWIDKHYLLEHQHSLATFSRQFANGSPLSLYTTNLTASHGGGQFIGLFEELTQMNVDVI YMQGQHYDPLWVQREQYDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29688; Mature: 29688
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWFVLCISKFIVYRLELIMNYLKQTSRYTNFNDSLTGMTIFNDLSIRGLIANKKTKRRLS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHC HDFPVYWIVLLCLLLFINDAIAEPNFEPEFESAFEAESITLTKIKSSLVKAEQSVSLIIV CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEE DSSLEQLEALLSGFSGEVHLLILEDNMEPFEQINQALYQEPPYSNVSIVAKASSSAIYLG CCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEC GRWIDKHYLLEHQHSLATFSRQFANGSPLSLYTTNLTASHGGGQFIGLFEELTQMNVDVI CEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCEEEE YMQGQHYDPLWVQREQYDF EECCCCCCCCEEEHHCCCC >Mature Secondary Structure MWFVLCISKFIVYRLELIMNYLKQTSRYTNFNDSLTGMTIFNDLSIRGLIANKKTKRRLS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEEECCCHHHHHHC HDFPVYWIVLLCLLLFINDAIAEPNFEPEFESAFEAESITLTKIKSSLVKAEQSVSLIIV CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCEEEEEE DSSLEQLEALLSGFSGEVHLLILEDNMEPFEQINQALYQEPPYSNVSIVAKASSSAIYLG CCCHHHHHHHHCCCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEC GRWIDKHYLLEHQHSLATFSRQFANGSPLSLYTTNLTASHGGGQFIGLFEELTQMNVDVI CEEECHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHCCEEEE YMQGQHYDPLWVQREQYDF EECCCCCCCCEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA