| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963287
Identifier: 157963287
GI number: 157963287
Start: 4243039
End: 4243737
Strand: Reverse
Name: 157963287
Synonym: Spea_3473
Alternate gene names: NA
Gene position: 4243737-4243039 (Counterclockwise)
Preceding gene: 157963289
Following gene: 157963286
Centisome position: 82.01
GC content: 47.21
Gene sequence:
>699_bases ATGTTGCGAAAACCCACCCCTTTCTCTAAGCGCAAAACCCACAACCTGTTTAAAAGCAAACTCAAACGCACTCTGGTCAG GATAAACTGGAAACGGTTCTGCTCAATCACGCTTCTGGCTGCACTGGCTTATGCTGCCCTCTATTACATTAACTCACCGG CCAGATTCGTAATGAACATGAGTATGGCGGACATGATCTACAACAGTCATCAACTCTCAAGCCAACAAATAGAAGAGGGC GGTGGGCAGGCACACTATCAAATGATTATAGAGGAACTGACTGCATTCGGTATTGACCCACACACCAGTCTTAATGATGT ATTGCAGGACCATCCACAAATCGCGTCAGTGGAGATAACACAAGACCGGGATTGGGAATACCGTATTCAGGGAACCTGGG ATACCGCGCCGGCCTTTTACGTGAGCGTCTGGATAACAGAAAAACACCGCGATGCCGGCTACACTGCCAAATTTTCATTG CGTAGCCCGTTGCACCTGCCTTTCAATTATCAATTCAATAACATCACCGGGTCAAAATGGATAGACACACCACCGGCCCC CAAGGCGCTGGCTGAAAGTCATATGTACTATGCTGAAACATTCAGGCAAACCGATAAAACTCCGTGGGAAGTCGTCTATC TATTACAACACAGTGAGTTTCCCCCCTTAACCTACGAATCAAAAGCCTCTGACATTTAG
Upstream 100 bases:
>100_bases GTATCCTGATCAAACATTTGACTTGCTCCAGCTCCAATATATCTTTACGCTGTGCGCCATTCGGCTGAATAAGCCAAAAC GCCTAATGTTGGTATCCTGA
Downstream 100 bases:
>100_bases CAATGGATGCTAATATTGCCCCCCATTGTTAATGGCATGTTTTTGGCTCTCCCTTGGATATCAAGGCCTAATACTCGAGA TTAAAACCAAGATGTATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 232
Protein sequence:
>232_residues MLRKPTPFSKRKTHNLFKSKLKRTLVRINWKRFCSITLLAALAYAALYYINSPARFVMNMSMADMIYNSHQLSSQQIEEG GGQAHYQMIIEELTAFGIDPHTSLNDVLQDHPQIASVEITQDRDWEYRIQGTWDTAPAFYVSVWITEKHRDAGYTAKFSL RSPLHLPFNYQFNNITGSKWIDTPPAPKALAESHMYYAETFRQTDKTPWEVVYLLQHSEFPPLTYESKASDI
Sequences:
>Translated_232_residues MLRKPTPFSKRKTHNLFKSKLKRTLVRINWKRFCSITLLAALAYAALYYINSPARFVMNMSMADMIYNSHQLSSQQIEEG GGQAHYQMIIEELTAFGIDPHTSLNDVLQDHPQIASVEITQDRDWEYRIQGTWDTAPAFYVSVWITEKHRDAGYTAKFSL RSPLHLPFNYQFNNITGSKWIDTPPAPKALAESHMYYAETFRQTDKTPWEVVYLLQHSEFPPLTYESKASDI >Mature_232_residues MLRKPTPFSKRKTHNLFKSKLKRTLVRINWKRFCSITLLAALAYAALYYINSPARFVMNMSMADMIYNSHQLSSQQIEEG GGQAHYQMIIEELTAFGIDPHTSLNDVLQDHPQIASVEITQDRDWEYRIQGTWDTAPAFYVSVWITEKHRDAGYTAKFSL RSPLHLPFNYQFNNITGSKWIDTPPAPKALAESHMYYAETFRQTDKTPWEVVYLLQHSEFPPLTYESKASDI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26932; Mature: 26932
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRKPTPFSKRKTHNLFKSKLKRTLVRINWKRFCSITLLAALAYAALYYINSPARFVMNM CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SMADMIYNSHQLSSQQIEEGGGQAHYQMIIEELTAFGIDPHTSLNDVLQDHPQIASVEIT HHHHHHHCCHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEE QDRDWEYRIQGTWDTAPAFYVSVWITEKHRDAGYTAKFSLRSPLHLPFNYQFNNITGSKW CCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEECCCCEECCEEEEECCCCCCCC IDTPPAPKALAESHMYYAETFRQTDKTPWEVVYLLQHSEFPPLTYESKASDI CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MLRKPTPFSKRKTHNLFKSKLKRTLVRINWKRFCSITLLAALAYAALYYINSPARFVMNM CCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH SMADMIYNSHQLSSQQIEEGGGQAHYQMIIEELTAFGIDPHTSLNDVLQDHPQIASVEIT HHHHHHHCCHHCCHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEEE QDRDWEYRIQGTWDTAPAFYVSVWITEKHRDAGYTAKFSLRSPLHLPFNYQFNNITGSKW CCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEECCCCEECCEEEEECCCCCCCC IDTPPAPKALAESHMYYAETFRQTDKTPWEVVYLLQHSEFPPLTYESKASDI CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA