| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963284
Identifier: 157963284
GI number: 157963284
Start: 4240876
End: 4241586
Strand: Reverse
Name: 157963284
Synonym: Spea_3470
Alternate gene names: NA
Gene position: 4241586-4240876 (Counterclockwise)
Preceding gene: 157963285
Following gene: 157963281
Centisome position: 81.97
GC content: 41.21
Gene sequence:
>711_bases ATGGCGTTTATAATTAAAGATACCAAATTGAATGTAGCTAAAACCGATATCTTCCATGATGAAGCTGGTTATGCTGCATT TCCAACTGCTGAGTCTGTGGTTTTTGACCGTGAGAAATTAATTCCAATTGGGTTGTTGTCATTCAATATGTTTGATGCAA GCATTGACGACAAAATACTCATTGCACTCCCTAATCTGCAAGGCATTCCCGATGGTGATTATGGCCCAATCACCTATTCG TATATTGATGAGCAACAAGGCTGGTGCTTAGATGACGAGTACGCCAATGATGATACGCTTGAGGAGCAAGACGAGTACTT AGACAACTATCAGCAAGCGCAGGACGAATTTGCTGCCAATAAGTGTTTGATGCGTCGTGACAAAAAGCTGCCATTAATCA CTTTGGGCGGCCAACCTAGATTTGGCCAGAATTGGGCTTCATGTTTATATAATGAACTGGCAAAGAACCCAGAGCTGGAT CATTACTATGAAGTGACCTGCAGCCTTAATCATCCTGAATTTGAACATATGAGCACTCGCGATATCGTTTATCTGGATCA GAAAGACAATAAAGAATATACCTTCATAGGCAGCTTTAAAGATGAAGCTTACTTGGTCAGAGATAGTGAGTACTTGGGCT TTGCCGGTGAGTTTATGGTGTTTTACCAGCCAGAGTTAAAGAAAGTCATGCTAGTAGCTGAGTACGATTAA
Upstream 100 bases:
>100_bases ACAAGAGCGTATACTGGCATCAATAATCTATGAATCGCTTGTGGAAAATGCTAGCGAATTAGCAGGTTAAACTATTAATA AAAGGAATGTGTTGTTAAAT
Downstream 100 bases:
>100_bases CTTGAAGTTGTTGTAGATGGTATAACAGGGGACAGTTACTTCTCTGCTGTAAACCTTGTGAGCAGTAAGCTCACAAGGTT ACGCGCTATCAGATGTTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MAFIIKDTKLNVAKTDIFHDEAGYAAFPTAESVVFDREKLIPIGLLSFNMFDASIDDKILIALPNLQGIPDGDYGPITYS YIDEQQGWCLDDEYANDDTLEEQDEYLDNYQQAQDEFAANKCLMRRDKKLPLITLGGQPRFGQNWASCLYNELAKNPELD HYYEVTCSLNHPEFEHMSTRDIVYLDQKDNKEYTFIGSFKDEAYLVRDSEYLGFAGEFMVFYQPELKKVMLVAEYD
Sequences:
>Translated_236_residues MAFIIKDTKLNVAKTDIFHDEAGYAAFPTAESVVFDREKLIPIGLLSFNMFDASIDDKILIALPNLQGIPDGDYGPITYS YIDEQQGWCLDDEYANDDTLEEQDEYLDNYQQAQDEFAANKCLMRRDKKLPLITLGGQPRFGQNWASCLYNELAKNPELD HYYEVTCSLNHPEFEHMSTRDIVYLDQKDNKEYTFIGSFKDEAYLVRDSEYLGFAGEFMVFYQPELKKVMLVAEYD >Mature_235_residues AFIIKDTKLNVAKTDIFHDEAGYAAFPTAESVVFDREKLIPIGLLSFNMFDASIDDKILIALPNLQGIPDGDYGPITYSY IDEQQGWCLDDEYANDDTLEEQDEYLDNYQQAQDEFAANKCLMRRDKKLPLITLGGQPRFGQNWASCLYNELAKNPELDH YYEVTCSLNHPEFEHMSTRDIVYLDQKDNKEYTFIGSFKDEAYLVRDSEYLGFAGEFMVFYQPELKKVMLVAEYD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27303; Mature: 27172
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIIKDTKLNVAKTDIFHDEAGYAAFPTAESVVFDREKLIPIGLLSFNMFDASIDDKIL CEEEEECCCCCEEEEEEEECCCCCEECCCCCCEEECCCCCCEEEEEEEEEECCCCCCEEE IALPNLQGIPDGDYGPITYSYIDEQQGWCLDDEYANDDTLEEQDEYLDNYQQAQDEFAAN EEECCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KCLMRRDKKLPLITLGGQPRFGQNWASCLYNELAKNPELDHYYEVTCSLNHPEFEHMSTR HHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCC DIVYLDQKDNKEYTFIGSFKDEAYLVRDSEYLGFAGEFMVFYQPELKKVMLVAEYD EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEEEECC >Mature Secondary Structure AFIIKDTKLNVAKTDIFHDEAGYAAFPTAESVVFDREKLIPIGLLSFNMFDASIDDKIL EEEEECCCCCEEEEEEEECCCCCEECCCCCCEEECCCCCCEEEEEEEEEECCCCCCEEE IALPNLQGIPDGDYGPITYSYIDEQQGWCLDDEYANDDTLEEQDEYLDNYQQAQDEFAAN EEECCCCCCCCCCCCCEEEEEEECCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH KCLMRRDKKLPLITLGGQPRFGQNWASCLYNELAKNPELDHYYEVTCSLNHPEFEHMSTR HHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHCCCCC DIVYLDQKDNKEYTFIGSFKDEAYLVRDSEYLGFAGEFMVFYQPELKKVMLVAEYD EEEEEECCCCCEEEEEECCCCCEEEEECCCCCCEEEEEEEEECCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA