| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963276
Identifier: 157963276
GI number: 157963276
Start: 4230224
End: 4230607
Strand: Reverse
Name: 157963276
Synonym: Spea_3462
Alternate gene names: NA
Gene position: 4230607-4230224 (Counterclockwise)
Preceding gene: 157963277
Following gene: 157963275
Centisome position: 81.76
GC content: 39.58
Gene sequence:
>384_bases ATGGACACCAGAGAGCAATTATTATCTTGTGTAAGAGAGTTTGAACAAAACAGTGAATCGATCACCATAAGCAAAGTTGC TCACAAATGTGGTTTATCGCATTCGCTCATTTACAACCGTCACCCTGACATCAAGGAGATGATCAACAACCTCAAGAAAA AACAAAAAGAACAAGCGTTAGTTGATCAGCAAAAAGACCAAACAAAGAAGCTACTTAAACGAAACGAAAACCTTGAGCGC AAGCTTGCTGAAGCAAAGGGGAAGGACGATAAGGAAACTATAGCCATGCTAATGGCACACATACATGAGCTTTACTCTAT GTATGACTCTTTATTGGAGGAGCGTAACGCTTTTGCTCAACGTATTCTTGAATTGGAAAGCTAA
Upstream 100 bases:
>100_bases TTAACAGGCTTAGAAGACAACCTTAACGCTGCTAATGAAATCATAAATAACCTTACTTCCACCACACCAATTAACGAGCA AACAACCGTAGAGAGCTAAT
Downstream 100 bases:
>100_bases TTAACTGCTAATTTAAGAAATAAAGCACGATGTTTTACAAGTATCACTGCCAACATCTCTGTTAGTGTTGGCTAACAATA TAGTCTGAACGAACCCAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQALVDQQKDQTKKLLKRNENLER KLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQRILELES
Sequences:
>Translated_127_residues MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQALVDQQKDQTKKLLKRNENLER KLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQRILELES >Mature_127_residues MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQALVDQQKDQTKKLLKRNENLER KLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQRILELES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14913; Mature: 14913
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQAL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH VDQQKDQTKKLLKRNENLERKLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQ HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RILELES HHHHHCC >Mature Secondary Structure MDTREQLLSCVREFEQNSESITISKVAHKCGLSHSLIYNRHPDIKEMINNLKKKQKEQAL CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH VDQQKDQTKKLLKRNENLERKLAEAKGKDDKETIAMLMAHIHELYSMYDSLLEERNAFAQ HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RILELES HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA