Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157963234

Identifier: 157963234

GI number: 157963234

Start: 4179110

End: 4180168

Strand: Reverse

Name: 157963234

Synonym: Spea_3420

Alternate gene names: NA

Gene position: 4180168-4179110 (Counterclockwise)

Preceding gene: 157963235

Following gene: 157963232

Centisome position: 80.78

GC content: 46.84

Gene sequence:

>1059_bases
TTGCAATTCGAGACTTTGAGAAAAACCCAACGGATCTGGTTTGGTTGTGTATTTGGGCTGGCCACCTCCTTAGTATTTGG
CTGGTCAAACGGTATGTTTGCGGCGCTGTTACCCATGTTTGTGCTCACCCAAATTGATAAGTGGAATAGTGGCATCATAG
TGCAGCTTATTGTGGGCGTCACTTGGGTCAGCATACAGGTCAGTTTTATTGTCGGTTTCTTTCAGTCAACGCCACTGTTA
ATGGCGATTGCGGTGGCAATTATGCTGATGTTTAAGTGTATCGCGATGACACATAAGAGCAGTTATCTCTTTGGTTACAT
TGGGCTCTTGATAGGCTCTATTCTACTTAACTATGCCAGCTACCAAGGCTTCGATTTAGAAGACTTTGTGATGGGGTTAA
TCGCTTCGTCTCTGCTGACTGCCCCGGTTGTTGCGCTGGCCTTTTACTTGTTCCCTGAGCCTAGTATTAAGCTGCCGCTA
TCTAGCTTAGGCAACACCAATCAGGCGAGTAGTCATATTGATAATCAGCGGAAAGATCATCTGGGCATGGTGAGGCAAGC
GGCGCTGGGTTGGATTATTGCAATGGCAGCATTTATCTTGTTTCAGGTAGCCACTCTTAATGACTCCTTATCGGCTCAAG
CCTCAATTTTGATTGTGTTGGCTCCCATGACCTTGATAGGCTCGATGGCGGTGGCTAAAATTCGTATTATAGGTACATTT
CTTGGTTGCTTAGCCGGGATGCTCCTGCAGCTAACCCTATACAGTCTGGCTAATAACCTGTTGCTGTTTGTACTCGGCTA
CGCAATTGCTGCGGCTATTTTTTGTCGCTGGCTGGCTATCGGCGGCATTAAAGCGGGTATCGGTTTCTCGGCGATGTCTG
CATTGACTGTACCGCTGACTACCGCTTTTGTGCCTGAGCAGCAAGATGCTTTCTTCTCTATCTGTTATCGCTTTAGTTCT
ATTGTGGTAGCAGTAGTGGTTACCTCGCTAATGATTTGGGTCGTACATCATTTGTTAGTGCGGCTGATAAAGCCTAAAGC
GCCAGCGCAGGTGATTTAG

Upstream 100 bases:

>100_bases
GCCAAGACTCAAATTAAGATCGTGAGTTGGCTTCACTTCATTTATTAACATTAGTTATTAACATTCGTTATTAACTTTGC
TGACGACCAGAGGCTACATT

Downstream 100 bases:

>100_bases
GCGTAAATAATACCAATTAGTTTAAGGCGTAACAGCCAAGTTCTAGGAGCGAAGACTCCCGGACTAGCTTTATGTTATGA
GAGGTTTTCGACCAATGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Facilitator Superfamily Permease

Number of amino acids: Translated: 352; Mature: 352

Protein sequence:

>352_residues
MQFETLRKTQRIWFGCVFGLATSLVFGWSNGMFAALLPMFVLTQIDKWNSGIIVQLIVGVTWVSIQVSFIVGFFQSTPLL
MAIAVAIMLMFKCIAMTHKSSYLFGYIGLLIGSILLNYASYQGFDLEDFVMGLIASSLLTAPVVALAFYLFPEPSIKLPL
SSLGNTNQASSHIDNQRKDHLGMVRQAALGWIIAMAAFILFQVATLNDSLSAQASILIVLAPMTLIGSMAVAKIRIIGTF
LGCLAGMLLQLTLYSLANNLLLFVLGYAIAAAIFCRWLAIGGIKAGIGFSAMSALTVPLTTAFVPEQQDAFFSICYRFSS
IVVAVVVTSLMIWVVHHLLVRLIKPKAPAQVI

Sequences:

>Translated_352_residues
MQFETLRKTQRIWFGCVFGLATSLVFGWSNGMFAALLPMFVLTQIDKWNSGIIVQLIVGVTWVSIQVSFIVGFFQSTPLL
MAIAVAIMLMFKCIAMTHKSSYLFGYIGLLIGSILLNYASYQGFDLEDFVMGLIASSLLTAPVVALAFYLFPEPSIKLPL
SSLGNTNQASSHIDNQRKDHLGMVRQAALGWIIAMAAFILFQVATLNDSLSAQASILIVLAPMTLIGSMAVAKIRIIGTF
LGCLAGMLLQLTLYSLANNLLLFVLGYAIAAAIFCRWLAIGGIKAGIGFSAMSALTVPLTTAFVPEQQDAFFSICYRFSS
IVVAVVVTSLMIWVVHHLLVRLIKPKAPAQVI
>Mature_352_residues
MQFETLRKTQRIWFGCVFGLATSLVFGWSNGMFAALLPMFVLTQIDKWNSGIIVQLIVGVTWVSIQVSFIVGFFQSTPLL
MAIAVAIMLMFKCIAMTHKSSYLFGYIGLLIGSILLNYASYQGFDLEDFVMGLIASSLLTAPVVALAFYLFPEPSIKLPL
SSLGNTNQASSHIDNQRKDHLGMVRQAALGWIIAMAAFILFQVATLNDSLSAQASILIVLAPMTLIGSMAVAKIRIIGTF
LGCLAGMLLQLTLYSLANNLLLFVLGYAIAAAIFCRWLAIGGIKAGIGFSAMSALTVPLTTAFVPEQQDAFFSICYRFSS
IVVAVVVTSLMIWVVHHLLVRLIKPKAPAQVI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38267; Mature: 38267

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFETLRKTQRIWFGCVFGLATSLVFGWSNGMFAALLPMFVLTQIDKWNSGIIVQLIVGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TWVSIQVSFIVGFFQSTPLLMAIAVAIMLMFKCIAMTHKSSYLFGYIGLLIGSILLNYAS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YQGFDLEDFVMGLIASSLLTAPVVALAFYLFPEPSIKLPLSSLGNTNQASSHIDNQRKDH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
LGMVRQAALGWIIAMAAFILFQVATLNDSLSAQASILIVLAPMTLIGSMAVAKIRIIGTF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
LGCLAGMLLQLTLYSLANNLLLFVLGYAIAAAIFCRWLAIGGIKAGIGFSAMSALTVPLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
TAFVPEQQDAFFSICYRFSSIVVAVVVTSLMIWVVHHLLVRLIKPKAPAQVI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MQFETLRKTQRIWFGCVFGLATSLVFGWSNGMFAALLPMFVLTQIDKWNSGIIVQLIVGV
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
TWVSIQVSFIVGFFQSTPLLMAIAVAIMLMFKCIAMTHKSSYLFGYIGLLIGSILLNYAS
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
YQGFDLEDFVMGLIASSLLTAPVVALAFYLFPEPSIKLPLSSLGNTNQASSHIDNQRKDH
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
LGMVRQAALGWIIAMAAFILFQVATLNDSLSAQASILIVLAPMTLIGSMAVAKIRIIGTF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHH
LGCLAGMLLQLTLYSLANNLLLFVLGYAIAAAIFCRWLAIGGIKAGIGFSAMSALTVPLT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHH
TAFVPEQQDAFFSICYRFSSIVVAVVVTSLMIWVVHHLLVRLIKPKAPAQVI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA