| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963224
Identifier: 157963224
GI number: 157963224
Start: 4168141
End: 4169985
Strand: Reverse
Name: 157963224
Synonym: Spea_3410
Alternate gene names: NA
Gene position: 4169985-4168141 (Counterclockwise)
Preceding gene: 157963225
Following gene: 157963222
Centisome position: 80.59
GC content: 46.4
Gene sequence:
>1845_bases ATGAAAATATTAACTCTTATTGCCAGCGTTACCGCAGCTTTGTTGCTGTCTGGTTGCAGTGATAAACCCGCTCAAATGGT GTGTGATACCTTCAATACGTGTTTCAATTTAAGCTTGGGGCAGGCAGTGAAAGAGACACAGGCTAATTCCGAATTCAGCC AATTAAAAGTGATTGTGGCGGTGGATTATGACGCGGGCGGCGATGTGCACACTAAGGTTCACGAGTCCAGTGGCTCTGCT GAGTTTGATGCCATTGCTAAAGAGCAGTTGCAGCGTTCAATGGAGGCGCTACTTGTCACTATGGAGGCACTGCCCGAAGC TGAGCGTGAAAGAGGCGATAGCATTCATATCAACTTTACCATCCAAACGGCAGACTTTCCCATAACGCCTAAGGTCGAGC CTAAGCCCGAGCTAGTAGAGAACTTTTATGAAAATGGTCAGTTGCAGAGTCGGGGCTATAAGCTTGATGGCGATAAGGTG GGTCATTGGCAGATATTTTTTGATGACGGCAGCTTAAGATTTGATTCTCAACATCCCAGTGGTGTGCAAAAGCAGTTTTC TAAAGATGGCCTACTCCTAGAAGAGGGGTATTTTGAAGATGGGGTAAAGCAGGGGACGTTTAAGAACTATGACTTCGATG GGCACTTGGACACTTTGCGCAATTACCAAGATGGCGAGTTGATAGGTGTGAATGAGCGCTATTTTAAAGATGGCGGGCTA GAAGAAAAGACACTGTTTGATGCCAATGGTAATGGCATGCATCAGGAGTTTTGGCCTAACGGGGCACTTAAGTGGGAGAC TGCGCTGGTTGCTCGGCAACCTACTGGCGAGCAAAAATACTTCGACGAAAATGGCGAGCTCATTGTTGAAAAGGCCCTAA CTGAAGCTAAGGTCATGCAGCAGTCTATTATCGATAAGGATTACGACACCTATATGCGCTTCGCCTTTAGCTACATGATT GAGTATGCGGGCGGTGAAGCTGCATTTAAAATTGGTACAGCAGCAATAATAGACAACTTGCAGCGTGATGGTATTAAGCA GGTCTCGACGATATTCAACGGGCCGACAAAAATGTTTCTGCAAGAGGAGGAGGTGGACGAATATTACGTTTACCTGCCTA TGGAGATCAATATGAGCACGCCTATAGGCGATGGTGTTGCAGAGACGGCTTTGATTGGGTTCTCTAAAGATATCGGCCAA ACCTGGAAATTTGTAGAGGCTTCCATTGGGCGTGAGGAAGTGCTTGTTTTGCTACCAAACCTGCCGGATGCGCTTGTGAT CCCGATTTTCCCAGAGCCTAGATTGATTAATGAGTCACAGACGACTTTAGCTGCTCAGCAAGCAGCGGGTGAGCAAAAAT ATTTCGATCAAAACGGTGAGCTTATTGCCGACAAGGCGTTAGTTGCAGCTAAAGTCATGAGGCAGTCTATTATCGATAAG GATTACGACGCTTATACGCGCTTTGCTCTTAGTGACGTTATTGATAACGCGGGTGGTGAAGCTGCATTGAAGCGTGAGAT AGCAGCAATGATGGATAAGTTACAAAGCGAAGGTCTTAAGCTTGAGTCGACAAGATTCAAGAAACCGACAAAAATTTATA TGCAGGAGGAGCTTGATGAATATTACGGTTACCTGCCTATGGAAATCAATATGAGCTCGCCAGTAGGCGATATAGTGGCT GAGTCGGCTTTGATTGGGGTATCTAAAGACAGTGGCGCAAACTGGAAGTTTGTTGAGGCGTTAGGTGGCCGTGAGGGAGT GCAATTGCTGCTGCCAAACTTGCCGGATGAACTTGAAATTCCGACCTTCCCAGGTCCTAGGTTGGTTAATGATAAGGCCG ATTAA
Upstream 100 bases:
>100_bases CATTGTTTGTGAACCGCTACACATAAAGCATACTGATATAACCCAAATTTAACGTTTTCATCTAGCATGCTCGCTATCTT TTTAGTAAGCCTGTGAATTT
Downstream 100 bases:
>100_bases CTAGCATTGGTATGATAAAAAGCGCTAGCAAAAATGGACTAGCGCTTTTTAGTTACATCATTGAAGTGACCGTTAAAACT AATTGACTTCACGATGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 614; Mature: 614
Protein sequence:
>614_residues MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVAVDYDAGGDVHTKVHESSGSA EFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFTIQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKV GHWQIFFDDGSLRFDSQHPSGVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQQSIIDKDYDTYMRFAFSYMI EYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFLQEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQ TWKFVEASIGREEVLVLLPNLPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDEYYGYLPMEINMSSPVGDIVA ESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEIPTFPGPRLVNDKAD
Sequences:
>Translated_614_residues MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVAVDYDAGGDVHTKVHESSGSA EFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFTIQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKV GHWQIFFDDGSLRFDSQHPSGVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQQSIIDKDYDTYMRFAFSYMI EYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFLQEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQ TWKFVEASIGREEVLVLLPNLPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDEYYGYLPMEINMSSPVGDIVA ESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEIPTFPGPRLVNDKAD >Mature_614_residues MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVAVDYDAGGDVHTKVHESSGSA EFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFTIQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKV GHWQIFFDDGSLRFDSQHPSGVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQQSIIDKDYDTYMRFAFSYMI EYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFLQEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQ TWKFVEASIGREEVLVLLPNLPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDEYYGYLPMEINMSSPVGDIVA ESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEIPTFPGPRLVNDKAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68349; Mature: 68349
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVA CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHEEEEEE VDYDAGGDVHTKVHESSGSAEFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFT EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEEE IQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKVGHWQIFFDDGSLRFDSQHPS EEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEEECCCEEECCCCCC GVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCHHHHCCCCC EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQ CCCEEEECCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHH QSIIDKDYDTYMRFAFSYMIEYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFL HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEEE QEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQTWKFVEASIGREEVLVLLPN ECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCC LPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHCC DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDE CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH YYGYLPMEINMSSPVGDIVAESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEI HHCCCEEEEECCCCHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCC PTFPGPRLVNDKAD CCCCCCCCCCCCCC >Mature Secondary Structure MKILTLIASVTAALLLSGCSDKPAQMVCDTFNTCFNLSLGQAVKETQANSEFSQLKVIVA CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHEEEEEE VDYDAGGDVHTKVHESSGSAEFDAIAKEQLQRSMEALLVTMEALPEAERERGDSIHINFT EECCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCEEEEEEE IQTADFPITPKVEPKPELVENFYENGQLQSRGYKLDGDKVGHWQIFFDDGSLRFDSQHPS EEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCEECCCCCCEEEEEEEECCCEEECCCCCC GVQKQFSKDGLLLEEGYFEDGVKQGTFKNYDFDGHLDTLRNYQDGELIGVNERYFKDGGL HHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEECCHHHHCCCCC EEKTLFDANGNGMHQEFWPNGALKWETALVARQPTGEQKYFDENGELIVEKALTEAKVMQ CCCEEEECCCCCCCHHHCCCCCCEEEEEEEEECCCCCCCEECCCCCEEEHHHHHHHHHHH QSIIDKDYDTYMRFAFSYMIEYAGGEAAFKIGTAAIIDNLQRDGIKQVSTIFNGPTKMFL HHHHCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHEEE QEEEVDEYYVYLPMEINMSTPIGDGVAETALIGFSKDIGQTWKFVEASIGREEVLVLLPN ECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCCEEEEECCC LPDALVIPIFPEPRLINESQTTLAAQQAAGEQKYFDQNGELIADKALVAAKVMRQSIIDK CCCCEEEEECCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEHHHHHHHHHHHHHHHHCC DYDAYTRFALSDVIDNAGGEAALKREIAAMMDKLQSEGLKLESTRFKKPTKIYMQEELDE CHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHH YYGYLPMEINMSSPVGDIVAESALIGVSKDSGANWKFVEALGGREGVQLLLPNLPDELEI HHCCCEEEEECCCCHHHHHHHHHEEEECCCCCCCEEEEECCCCCCCEEEECCCCCCCCCC PTFPGPRLVNDKAD CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA