| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963190
Identifier: 157963190
GI number: 157963190
Start: 4123161
End: 4123682
Strand: Reverse
Name: 157963190
Synonym: Spea_3375
Alternate gene names: NA
Gene position: 4123682-4123161 (Counterclockwise)
Preceding gene: 157963191
Following gene: 157963189
Centisome position: 79.69
GC content: 31.8
Gene sequence:
>522_bases ATGAATACTGAAAGTAAAATTTGCGAAGAACTTATTACACACTTGTCTAAATGCGTCTTAATAGATTTTGATAATATTAT AGTTTGGGAGGACGCTAGTACATTAAAGGAAACAGCGTTGGCTTTTCCAATAACTCATTCTGATGCCCACTTGGTTTTTA CTATTGCAAACGATAGAAATATATTCCTTGCTACTCTAACTGATGGTGATATTGATGATGTAGTATCAATCCTTCTGGAT CTTAATGAAGCTGATTTTAAGGCTGAATGGGGGAAAGCTGTAACTACGAGTTATGAAAGCTTAAATAGAAAAAACATATA CGGCCTTTTCTTTAGTCGAGTTAGGTACTATGAATTATTCCATTCAATAAAAGATTCATTTCGATTCTTAGGTAAGGAAT ATACTATCAAAGCTGTAATTTTTTTGTCTAAAAAAGAGATAGAGACCTATATAAATAGCGAAGATGAGTTTTATGAGCTG ATTGGTGAAAAAGATATGGTTAAATTTGAACAGGTTAAGTAA
Upstream 100 bases:
>100_bases CAACCAAGAAAAAGGTAAAAAGAATGTTGATGATTTTCCCAAGAAGGAAAAAGAATCGAAAAGGATCTCTCGTCGTAGAA GATAATGAGTAAATAATGCT
Downstream 100 bases:
>100_bases AGCCTTGCCACCAAAAATACAACCTATAAGCATCTAGACATATATGGACAGGCATAGTTAATTGCGTAAATTCCACAGCT CCAACTAAATTTTAGTTATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MNTESKICEELITHLSKCVLIDFDNIIVWEDASTLKETALAFPITHSDAHLVFTIANDRNIFLATLTDGDIDDVVSILLD LNEADFKAEWGKAVTTSYESLNRKNIYGLFFSRVRYYELFHSIKDSFRFLGKEYTIKAVIFLSKKEIETYINSEDEFYEL IGEKDMVKFEQVK
Sequences:
>Translated_173_residues MNTESKICEELITHLSKCVLIDFDNIIVWEDASTLKETALAFPITHSDAHLVFTIANDRNIFLATLTDGDIDDVVSILLD LNEADFKAEWGKAVTTSYESLNRKNIYGLFFSRVRYYELFHSIKDSFRFLGKEYTIKAVIFLSKKEIETYINSEDEFYEL IGEKDMVKFEQVK >Mature_173_residues MNTESKICEELITHLSKCVLIDFDNIIVWEDASTLKETALAFPITHSDAHLVFTIANDRNIFLATLTDGDIDDVVSILLD LNEADFKAEWGKAVTTSYESLNRKNIYGLFFSRVRYYELFHSIKDSFRFLGKEYTIKAVIFLSKKEIETYINSEDEFYEL IGEKDMVKFEQVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20076; Mature: 20076
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTESKICEELITHLSKCVLIDFDNIIVWEDASTLKETALAFPITHSDAHLVFTIANDRN CCCHHHHHHHHHHHHHHEEEEECCCEEEECCCHHHHHHHHEEEEECCCCEEEEEEECCCE IFLATLTDGDIDDVVSILLDLNEADFKAEWGKAVTTSYESLNRKNIYGLFFSRVRYYELF EEEEEECCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH HSIKDSFRFLGKEYTIKAVIFLSKKEIETYINSEDEFYELIGEKDMVKFEQVK HHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHCCCHHHHHHHCCCCCCCEECCC >Mature Secondary Structure MNTESKICEELITHLSKCVLIDFDNIIVWEDASTLKETALAFPITHSDAHLVFTIANDRN CCCHHHHHHHHHHHHHHEEEEECCCEEEECCCHHHHHHHHEEEEECCCCEEEEEEECCCE IFLATLTDGDIDDVVSILLDLNEADFKAEWGKAVTTSYESLNRKNIYGLFFSRVRYYELF EEEEEECCCCHHHHHHHHHCCCCCCCHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHH HSIKDSFRFLGKEYTIKAVIFLSKKEIETYINSEDEFYELIGEKDMVKFEQVK HHHHHHHHHCCCCEEEEEEEEEEHHHHHHHHCCCHHHHHHHCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA