| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963125
Identifier: 157963125
GI number: 157963125
Start: 4052297
End: 4053148
Strand: Reverse
Name: 157963125
Synonym: Spea_3309
Alternate gene names: NA
Gene position: 4053148-4052297 (Counterclockwise)
Preceding gene: 157963126
Following gene: 157963123
Centisome position: 78.33
GC content: 44.25
Gene sequence:
>852_bases ATGAACCAAATTCAGCAATTAGAAGCCGAAGCTTTTACCATTTTAGACTTACACCTTAAAAACGCTTTATCAATGGCCGA TTCTGACAGCATCACTCAGATTGTTATTGGTCCACAGTGTTTATGTGAAGCGGTATGCATTGAGTTGGGAGCGGATATTC ATCAATTTATTATGCTCAATGATGAGCAGTTTGAGCAAGGTTATGCCTTTGTCGAAGGCATTATAGAAAGAGACCGTAGC TCATTAATTGGTGATGTGAGTGGTATAGTTGGCTCGGTTATCAACCCTATAGGAAAGTGGGTTAGAGACTCTGTTGGTGA GCAGTTAGCAGACGATCCTATTTATATCGAACTGCGCAATATGTACCAAACTTTTGGCATGGATATCGTTCTGGGGATTT TCAGTGAATTGCTTAACCGTGGCAATGAGCCGGATCTATTGATTGCAGCCATGAGTAAATGGCGTGAAGAGTTGGGTTAT ATAGAAGGCTTTGACACCGAAGTCGAGCGTAACTTACTAGAGGGGATCGTCTCAGGTAAAAACAACAGCGCGGAAGCTAA AAAAGCCGAGATTGCCGGGTCTGTTGGTGGAGCGCTGGTGGGGGCAAAAGTTGGCGCGGTTATGGGGTCAATAGTACCAG GGGCTGGCACCATAGTCGGGGCGGCTGCAGGAGCGACTATCGGTAAACATTTTGGCGGAAAGGAACTGAATAAGTGCGGC CAAAATGAAGCCGTTAGCGAGGCTATTAATGATGTTAGTGGTAGGGTTAATGAAGTCAGTAGTAGTGTCAGCAATGTGGC TAGCGATACAGTGAATAGTATGAAAAACAAATTTAATAAGCTTTGGGCTTAA
Upstream 100 bases:
>100_bases CCTACATAGGTGATATCGATGCGGGTGATAACCTCACCGACTCCATTCTTAACTTTATTAATACCTAACTACAAATTCCT AATTAAAGATAGGGTCGGCA
Downstream 100 bases:
>100_bases GTGATACATCGAGTTATTAATGTTTTAAGCTATATAGAGGTCATCAATGTTAGCTGCAGCTCTTTCTCCGTTGATATTAG TCATCGTACTTTGGTGTAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MNQIQQLEAEAFTILDLHLKNALSMADSDSITQIVIGPQCLCEAVCIELGADIHQFIMLNDEQFEQGYAFVEGIIERDRS SLIGDVSGIVGSVINPIGKWVRDSVGEQLADDPIYIELRNMYQTFGMDIVLGIFSELLNRGNEPDLLIAAMSKWREELGY IEGFDTEVERNLLEGIVSGKNNSAEAKKAEIAGSVGGALVGAKVGAVMGSIVPGAGTIVGAAAGATIGKHFGGKELNKCG QNEAVSEAINDVSGRVNEVSSSVSNVASDTVNSMKNKFNKLWA
Sequences:
>Translated_283_residues MNQIQQLEAEAFTILDLHLKNALSMADSDSITQIVIGPQCLCEAVCIELGADIHQFIMLNDEQFEQGYAFVEGIIERDRS SLIGDVSGIVGSVINPIGKWVRDSVGEQLADDPIYIELRNMYQTFGMDIVLGIFSELLNRGNEPDLLIAAMSKWREELGY IEGFDTEVERNLLEGIVSGKNNSAEAKKAEIAGSVGGALVGAKVGAVMGSIVPGAGTIVGAAAGATIGKHFGGKELNKCG QNEAVSEAINDVSGRVNEVSSSVSNVASDTVNSMKNKFNKLWA >Mature_283_residues MNQIQQLEAEAFTILDLHLKNALSMADSDSITQIVIGPQCLCEAVCIELGADIHQFIMLNDEQFEQGYAFVEGIIERDRS SLIGDVSGIVGSVINPIGKWVRDSVGEQLADDPIYIELRNMYQTFGMDIVLGIFSELLNRGNEPDLLIAAMSKWREELGY IEGFDTEVERNLLEGIVSGKNNSAEAKKAEIAGSVGGALVGAKVGAVMGSIVPGAGTIVGAAAGATIGKHFGGKELNKCG QNEAVSEAINDVSGRVNEVSSSVSNVASDTVNSMKNKFNKLWA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30169; Mature: 30169
Theoretical pI: Translated: 4.24; Mature: 4.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQIQQLEAEAFTILDLHLKNALSMADSDSITQIVIGPQCLCEAVCIELGADIHQFIMLN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHCC DEQFEQGYAFVEGIIERDRSSLIGDVSGIVGSVINPIGKWVRDSVGEQLADDPIYIELRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH MYQTFGMDIVLGIFSELLNRGNEPDLLIAAMSKWREELGYIEGFDTEVERNLLEGIVSGK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC NNSAEAKKAEIAGSVGGALVGAKVGAVMGSIVPGAGTIVGAAAGATIGKHFGGKELNKCG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCC QNEAVSEAINDVSGRVNEVSSSVSNVASDTVNSMKNKFNKLWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNQIQQLEAEAFTILDLHLKNALSMADSDSITQIVIGPQCLCEAVCIELGADIHQFIMLN CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHCC DEQFEQGYAFVEGIIERDRSSLIGDVSGIVGSVINPIGKWVRDSVGEQLADDPIYIELRN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH MYQTFGMDIVLGIFSELLNRGNEPDLLIAAMSKWREELGYIEGFDTEVERNLLEGIVSGK HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC NNSAEAKKAEIAGSVGGALVGAKVGAVMGSIVPGAGTIVGAAAGATIGKHFGGKELNKCG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHCC QNEAVSEAINDVSGRVNEVSSSVSNVASDTVNSMKNKFNKLWA CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA