| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963065
Identifier: 157963065
GI number: 157963065
Start: 3984241
End: 3985596
Strand: Reverse
Name: 157963065
Synonym: Spea_3248
Alternate gene names: NA
Gene position: 3985596-3984241 (Counterclockwise)
Preceding gene: 157963067
Following gene: 157963064
Centisome position: 77.02
GC content: 50.96
Gene sequence:
>1356_bases ATGAAAAATTGGCAAATTATTAACCGCTTTGAACAGGTGCCACAGCTACCTATCTTGGCTGAGGTCGATGTCTTGGTCGT GGGTGGTGGTCCTGCTGGCGTTGCTGCTGCAGAAACCGCATCGGCTGCGGGCAAGAGTACTTACCTAGTTGAAAAATATG GCTTCTGCGGCGGCGCTGCCGTAGCAGGACTGTCTGGCACAATTTGTGGCATGTATATGGCGACCGAAGATGAAGCCGCC GGGCCAGAGCAGGTTGTTTTCGGCTTTACCGAACGTTTCCGTCAGGCATTAGCTGATAATAATGGGGTGACTGCACCACA GCGCTATGGCAAGACATTTACCGTTACTCATGACCCTCTAGTATGGCGTGAAGTGGCGGATGATATGTTAACGGCCGCAG GGGTGAATATCTTGTATCACACTGCTGTTACAGGCGTGATTATGGATGGCGACAGCTTCAAAGGTGTGGTGATTGAATCA AATGCAGGCCAGAGCATTATTCTTGCAAAAATTATCATCGACGCTTCAGGTGATGCTGCCGTCATCGCGCGTGCAGGGCT TGATACCTACTTTGGTGATGAAGGTCGCATTCAAAATCCAACCATGTTCTTCCGTATCGCGGGCGTGGATATGGAGCAGT ATCTAGAGTACTACGGTATGGACACCATCTGCCCGCCGAAAGTGACCGAGAACATTCTAAAAGCGAATAATGAATTAGGC TGGGAGCTACCACGTCATAAGATCTGGATCTTCCCGACCACACGTCCTGGCGAGCTGATGGTTAATGCGACTCGTTTGGC AGGCCAAGATGGTCGTATGTTGAACGTGATTGACCCTGTTGACTTTACCGAAGCCGAAGTCTTTGGTCGTCGCCAAGTTC GCGCCTATGCCAAGTTCCTTAATGAGTTTGTGCCTGGGTGTGACAATGCCTACGTGGTTGATACCGGTGTTGAAGTGGGG ATTCGTCAGACGCGTTCTATCAAGGGGGTGAAGACACTGACTAATGATGATGTGGTTAACTGTCGCAAACAGCAAGATGG TATCTGTCGTACACCTTGGCCAATTGAGTTGCACTCGGGCGATAAGCCAAAGCTGCACTGGTTACTAAATGATTACTACG ACATTCCTTTCGCCACTCTAGTCCCTCGAGTGGGTGAAAACATCATAGTCGCGGGTCGCTGTCTCAGTGCAGAGCACGAA GCGCTGGCGTCGGCGCGAGTCACCGCCCAATGTTTCGAATTAGGCCACGCCGCAGGCGTTGCCGCTATACAAGCTATCGA TAGTCAAAGTCACATCCGTGACCTGAATGTTGCAGAGATCCGCGCGACCATGATTGCCAATGGTAGTGCGCTGTAA
Upstream 100 bases:
>100_bases TATATTAGCCCCCAACAACTGATATATCAGATGAATATCACCTGCATATTAGGTGTGTATTAGCTTGGTCTGGCTCATAT CAGCATCCTTTGGAGTAAAA
Downstream 100 bases:
>100_bases CCCAATATAACTCGCCGCATCGATTATGCTAACAGCATAAGGCGGCATCAAGCTTGCTCCTTAAATAATAACAAAAAGGG GCAGCGTGGAATTTACCTAT
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Invasion Protein IbeA; Glucose-Inhibited Division Protein A; Fumarate Reductase/Succinate Dehydrogenase Flavoprotein; Dihydrolipoamide Dehydrogenase; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; Thiamine Biosynthesis Thi4 Protein; Invasion Protein IbeA Family Protein; Protein Involved In Invasion; FAD Dependent Oxidoreductase Domain Protein; Invasion Protein; Pyridine Nucleotide-Disulfide Oxidoreductase Family; tRNA Uridine 5-Carboxymethylaminomethyl GidA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAAVAGLSGTICGMYMATEDEAA GPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPLVWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIES NAGQSIILAKIIIDASGDAAVIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFLNEFVPGCDNAYVVDTGVEVG IRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSGDKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHE ALASARVTAQCFELGHAAGVAAIQAIDSQSHIRDLNVAEIRATMIANGSAL
Sequences:
>Translated_451_residues MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAAVAGLSGTICGMYMATEDEAA GPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPLVWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIES NAGQSIILAKIIIDASGDAAVIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFLNEFVPGCDNAYVVDTGVEVG IRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSGDKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHE ALASARVTAQCFELGHAAGVAAIQAIDSQSHIRDLNVAEIRATMIANGSAL >Mature_451_residues MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAAVAGLSGTICGMYMATEDEAA GPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPLVWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIES NAGQSIILAKIIIDASGDAAVIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFLNEFVPGCDNAYVVDTGVEVG IRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSGDKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHE ALASARVTAQCFELGHAAGVAAIQAIDSQSHIRDLNVAEIRATMIANGSAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48917; Mature: 48917
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAA CCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHH VAGLSGTICGMYMATEDEAAGPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPL HHCCCCCEEEEEEECCCCCCCCHHEEHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCH VWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIESNAGQSIILAKIIIDASGDAA HHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEECCCCEE VIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG EEEECCCCHHCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFL CCCCCCEEEEEECCCCCCEEEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH NEFVPGCDNAYVVDTGVEVGIRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSG HHHCCCCCCCEEEECCCEECCHHHCCCCCCEECCCCCHHHHHHHCCCCCCCCCEEEECCC DKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHEALASARVTAQCFELGHAAGV CCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH AAIQAIDSQSHIRDLNVAEIRATMIANGSAL HHHHHHCCHHHHCCCCHHHHEEEEEECCCCC >Mature Secondary Structure MKNWQIINRFEQVPQLPILAEVDVLVVGGGPAGVAAAETASAAGKSTYLVEKYGFCGGAA CCCHHHHHHHHHCCCCCEEEEEEEEEECCCCCCCHHHHHHHCCCCCEEEEEECCCCCCHH VAGLSGTICGMYMATEDEAAGPEQVVFGFTERFRQALADNNGVTAPQRYGKTFTVTHDPL HHCCCCCEEEEEEECCCCCCCCHHEEHHHHHHHHHHHCCCCCCCCHHHCCCEEEEECCCH VWREVADDMLTAAGVNILYHTAVTGVIMDGDSFKGVVIESNAGQSIILAKIIIDASGDAA HHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCCCEEEEECCCCCEEEEEEEEEECCCCEE VIARAGLDTYFGDEGRIQNPTMFFRIAGVDMEQYLEYYGMDTICPPKVTENILKANNELG EEEECCCCHHCCCCCCCCCCEEEEEEECCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCC WELPRHKIWIFPTTRPGELMVNATRLAGQDGRMLNVIDPVDFTEAEVFGRRQVRAYAKFL CCCCCCEEEEEECCCCCCEEEEEHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH NEFVPGCDNAYVVDTGVEVGIRQTRSIKGVKTLTNDDVVNCRKQQDGICRTPWPIELHSG HHHCCCCCCCEEEECCCEECCHHHCCCCCCEECCCCCHHHHHHHCCCCCCCCCEEEECCC DKPKLHWLLNDYYDIPFATLVPRVGENIIVAGRCLSAEHEALASARVTAQCFELGHAAGV CCCEEEEEECCCCCCCHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH AAIQAIDSQSHIRDLNVAEIRATMIANGSAL HHHHHHCCHHHHCCCCHHHHEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA