| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963058
Identifier: 157963058
GI number: 157963058
Start: 3975935
End: 3976420
Strand: Reverse
Name: 157963058
Synonym: Spea_3241
Alternate gene names: NA
Gene position: 3976420-3975935 (Counterclockwise)
Preceding gene: 157963059
Following gene: 157963052
Centisome position: 76.85
GC content: 46.09
Gene sequence:
>486_bases ATGCAAACAGCTGAACACTTTATTCAACACCTAGAATTAGAACAACATGTTGAAGGTGGTTATTTCCGCTCTTCATACCG CTCTGAGCAACAATTCGATGACACGCGTGCCCTTTGGACCAGCATTTACTTTTTATTGCGTACCGGTGAGGTGTCTAACT TCCATCGTTTAACCGCCGATGAAATGTGGTATTTCCACGCGGGTGAGTCACTGACCATCTATATGATTGATGAGCAAGGC GAGCTGACCACGGCGCAATTAGGTTTAGACTTGGCTGCGGGTGAGCGACCACAGTTTTTAGTACCTAAAGGCTGCATCTT CGGTTCGGCGATGAATAAGCCAGGATTCTCTTTAGTCGGATGTATGGTGTCGCCGGGCTTTACCTTTGAAGATTTTGAGC TGTTTAGCCAAGAAACCTTGTTAGCTGAATATCCGCAGCATGAAGAAATCATTAAGCGTTTAAGCCGCAGTGGTGTTGGT AGCTAG
Upstream 100 bases:
>100_bases ATTACACTTTAGCGCTACTTTGTAGATATAAATGCTCCCTACTAAACCCTGTTAGTTTCAATAGAAACGTGCATCAGATT AAAATTAAAAGGTATTTGCA
Downstream 100 bases:
>100_bases TTGTTTAATTGATATTGTTATTCAAAAGGCGCTTGGTATGCTCACTTAGCGCCTTTTCTGTATTTGTGATAGCCCTATGG CTTTTTGTTTAGCACTGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MQTAEHFIQHLELEQHVEGGYFRSSYRSEQQFDDTRALWTSIYFLLRTGEVSNFHRLTADEMWYFHAGESLTIYMIDEQG ELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNKPGFSLVGCMVSPGFTFEDFELFSQETLLAEYPQHEEIIKRLSRSGVG S
Sequences:
>Translated_161_residues MQTAEHFIQHLELEQHVEGGYFRSSYRSEQQFDDTRALWTSIYFLLRTGEVSNFHRLTADEMWYFHAGESLTIYMIDEQG ELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNKPGFSLVGCMVSPGFTFEDFELFSQETLLAEYPQHEEIIKRLSRSGVG S >Mature_161_residues MQTAEHFIQHLELEQHVEGGYFRSSYRSEQQFDDTRALWTSIYFLLRTGEVSNFHRLTADEMWYFHAGESLTIYMIDEQG ELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNKPGFSLVGCMVSPGFTFEDFELFSQETLLAEYPQHEEIIKRLSRSGVG S
Specific function: Unknown
COG id: COG3542
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18375; Mature: 18375
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTAEHFIQHLELEQHVEGGYFRSSYRSEQQFDDTRALWTSIYFLLRTGEVSNFHRLTAD CCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHH EMWYFHAGESLTIYMIDEQGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNKPGFSLVG HEEEEECCCEEEEEEECCCCCEEEHHHCEEECCCCCCCEECCCCEEECCCCCCCCCEEEE CMVSPGFTFEDFELFSQETLLAEYPQHEEIIKRLSRSGVGS EEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC >Mature Secondary Structure MQTAEHFIQHLELEQHVEGGYFRSSYRSEQQFDDTRALWTSIYFLLRTGEVSNFHRLTAD CCHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCHH EMWYFHAGESLTIYMIDEQGELTTAQLGLDLAAGERPQFLVPKGCIFGSAMNKPGFSLVG HEEEEECCCEEEEEEECCCCCEEEHHHCEEECCCCCCCEECCCCEEECCCCCCCCCEEEE CMVSPGFTFEDFELFSQETLLAEYPQHEEIIKRLSRSGVGS EEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA