| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963050
Identifier: 157963050
GI number: 157963050
Start: 3963814
End: 3965004
Strand: Reverse
Name: 157963050
Synonym: Spea_3233
Alternate gene names: NA
Gene position: 3965004-3963814 (Counterclockwise)
Preceding gene: 157963052
Following gene: 157963049
Centisome position: 76.62
GC content: 43.83
Gene sequence:
>1191_bases ATGAAAGTCCATGCCCTTACCCTAGCTGTACTCGCAAGCTTAGCTTCAACTGCCGTAACCGCAGAAACCGTTGACCCACT AAAGAAAGCCTTTATCGATGACTCCGCTGTAAAAGTACAGTTCCGTCTTCGTTATGAAGATGTGGATGTGGCGAATGTTG ATCAGCAAAATCAAACCACCTTGCGTACCCGCCTGAACTATCAAACTGGCGATCTGTATAACTTATTTGCTGTTGCCGAA ATTGACGATGTTCGGTCTACAGATAATGAGCCATTGATTGCAGATTATAAATATACCCAAATTAACCAAGGTTACATTGG TTATAAAGGCCCTGCTGAAACGCTAGCAAAGCTTGGTCGTCAACGTATTTTACTCGATAACCAGCGTTTTGTGGGGGGGG TGGGTTTCCGCCAAAATGAGCAGACATATGACGCGGTTTCGGTGAAGAACACTGCAATCGAAGGCTTGACGGCATACTAC GCTTATGTGGCTAATGTGAACCGTATTTTCCCTGAAGGTTCAGGCAAAGAAGAACATGAAAACGAAACTAACTTAGTCAA TATCAACTACAAGGCATTGGATTTCGCTAAGATCTCTGGTTATGGCTATTTAATTGATAATATTGATGTACCCTCTTTTT CTACCGATACCTATGGTATCCGCGCAACGGGTGATATCAAGCTTGATTCATTAAAGCTTAGCTACGAAGCAGAATATGCA CAGCAGTCAGAAGGTAGCGATAACCCTGTAAGTTACAGCGCGTCTTACTACAAGCTAGGTGCAGGCGTTAACTTCGATGC TTTTGGCGCCAAAGTTGGTTACGAAGTACTGGGCTCGGATGACGGCAAGGCTGGATTTATCACGCCTCTTGCGACATTGC ACGCCTTTAACGGTTGGACAGATAAGTTCTTGTTTGGTGGTAAAGGTAACTGGGAAAATGGCCTAGTCGATACTCACTTC ATTGTTACCGCTAAGCTTGCAGGGCTAAAACTGTTGGCTAAATACCATATGTTTGAATCTGATTATGGTGACATCGATAT GGGTAAAGAGTGGGGCGTTGCTGCGACTTATCCATTTGCTAAGTACTATAGCGTAGGGATTAAATATGCCAGTTTCAGTG GTGCGGATGCGGGATACGGTTTCTCAAATGATACCGATAAATTATGGCTAACAATGCAAGCCAAGTACTAA
Upstream 100 bases:
>100_bases AATTGTAATCAAGGTGTAACATTGTTTTAGATCAAAAAGTTAAATCTGTTTCATTAATATAACTGCATGTGAGAATGATG AAACGAAAGGATTACAATAA
Downstream 100 bases:
>100_bases ATGAAACTGGACGTAAGTCTAACTTAGTTGTATTGAGCCCACACATGGGCTCAGCTAAAAGCTCCCATTTATAAGCAGGA TACTTAAGTTATTCCTGCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MKVHALTLAVLASLASTAVTAETVDPLKKAFIDDSAVKVQFRLRYEDVDVANVDQQNQTTLRTRLNYQTGDLYNLFAVAE IDDVRSTDNEPLIADYKYTQINQGYIGYKGPAETLAKLGRQRILLDNQRFVGGVGFRQNEQTYDAVSVKNTAIEGLTAYY AYVANVNRIFPEGSGKEEHENETNLVNINYKALDFAKISGYGYLIDNIDVPSFSTDTYGIRATGDIKLDSLKLSYEAEYA QQSEGSDNPVSYSASYYKLGAGVNFDAFGAKVGYEVLGSDDGKAGFITPLATLHAFNGWTDKFLFGGKGNWENGLVDTHF IVTAKLAGLKLLAKYHMFESDYGDIDMGKEWGVAATYPFAKYYSVGIKYASFSGADAGYGFSNDTDKLWLTMQAKY
Sequences:
>Translated_396_residues MKVHALTLAVLASLASTAVTAETVDPLKKAFIDDSAVKVQFRLRYEDVDVANVDQQNQTTLRTRLNYQTGDLYNLFAVAE IDDVRSTDNEPLIADYKYTQINQGYIGYKGPAETLAKLGRQRILLDNQRFVGGVGFRQNEQTYDAVSVKNTAIEGLTAYY AYVANVNRIFPEGSGKEEHENETNLVNINYKALDFAKISGYGYLIDNIDVPSFSTDTYGIRATGDIKLDSLKLSYEAEYA QQSEGSDNPVSYSASYYKLGAGVNFDAFGAKVGYEVLGSDDGKAGFITPLATLHAFNGWTDKFLFGGKGNWENGLVDTHF IVTAKLAGLKLLAKYHMFESDYGDIDMGKEWGVAATYPFAKYYSVGIKYASFSGADAGYGFSNDTDKLWLTMQAKY >Mature_396_residues MKVHALTLAVLASLASTAVTAETVDPLKKAFIDDSAVKVQFRLRYEDVDVANVDQQNQTTLRTRLNYQTGDLYNLFAVAE IDDVRSTDNEPLIADYKYTQINQGYIGYKGPAETLAKLGRQRILLDNQRFVGGVGFRQNEQTYDAVSVKNTAIEGLTAYY AYVANVNRIFPEGSGKEEHENETNLVNINYKALDFAKISGYGYLIDNIDVPSFSTDTYGIRATGDIKLDSLKLSYEAEYA QQSEGSDNPVSYSASYYKLGAGVNFDAFGAKVGYEVLGSDDGKAGFITPLATLHAFNGWTDKFLFGGKGNWENGLVDTHF IVTAKLAGLKLLAKYHMFESDYGDIDMGKEWGVAATYPFAKYYSVGIKYASFSGADAGYGFSNDTDKLWLTMQAKY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43728; Mature: 43728
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVHALTLAVLASLASTAVTAETVDPLKKAFIDDSAVKVQFRLRYEDVDVANVDQQNQTT CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEECCCCCCCEE LRTRLNYQTGDLYNLFAVAEIDDVRSTDNEPLIADYKYTQINQGYIGYKGPAETLAKLGR EEEEECCCCCCEEEEEEEEEEHHHCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHCCC QRILLDNQRFVGGVGFRQNEQTYDAVSVKNTAIEGLTAYYAYVANVNRIFPEGSGKEEHE CEEEECCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NETNLVNINYKALDFAKISGYGYLIDNIDVPSFSTDTYGIRATGDIKLDSLKLSYEAEYA CCCCEEEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEEEEEHHHH QQSEGSDNPVSYSASYYKLGAGVNFDAFGAKVGYEVLGSDDGKAGFITPLATLHAFNGWT HHCCCCCCCEEECCCEEEECCCCCCHHCCCCCCEEEECCCCCCCEEEHHHHHHHHCCCCC DKFLFGGKGNWENGLVDTHFIVTAKLAGLKLLAKYHMFESDYGDIDMGKEWGVAATYPFA CCEEECCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHH KYYSVGIKYASFSGADAGYGFSNDTDKLWLTMQAKY HHHEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MKVHALTLAVLASLASTAVTAETVDPLKKAFIDDSAVKVQFRLRYEDVDVANVDQQNQTT CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEECCCCCCCEE LRTRLNYQTGDLYNLFAVAEIDDVRSTDNEPLIADYKYTQINQGYIGYKGPAETLAKLGR EEEEECCCCCCEEEEEEEEEEHHHCCCCCCCEEEEEEEEEECCCCCCCCCHHHHHHHCCC QRILLDNQRFVGGVGFRQNEQTYDAVSVKNTAIEGLTAYYAYVANVNRIFPEGSGKEEHE CEEEECCCEEEECCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC NETNLVNINYKALDFAKISGYGYLIDNIDVPSFSTDTYGIRATGDIKLDSLKLSYEAEYA CCCCEEEEEEEEEEEEEECCEEEEEECCCCCCCCCCCCEEEEECCEEEEEEEEEEEHHHH QQSEGSDNPVSYSASYYKLGAGVNFDAFGAKVGYEVLGSDDGKAGFITPLATLHAFNGWT HHCCCCCCCEEECCCEEEECCCCCCHHCCCCCCEEEECCCCCCCEEEHHHHHHHHCCCCC DKFLFGGKGNWENGLVDTHFIVTAKLAGLKLLAKYHMFESDYGDIDMGKEWGVAATYPFA CCEEECCCCCCCCCCEEEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCHH KYYSVGIKYASFSGADAGYGFSNDTDKLWLTMQAKY HHHEEEEEEEECCCCCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA