Click here to switch to the map view.

The map label for this gene is cicA [H]

Identifier: 157963045

GI number: 157963045

Start: 3956915

End: 3957505

Strand: Reverse

Name: cicA [H]

Synonym: Spea_3228

Alternate gene names: 157963045

Gene position: 3957505-3956915 (Counterclockwise)

Preceding gene: 157963046

Following gene: 157963043

Centisome position: 76.48

GC content: 46.7

Gene sequence:

>591_bases
TTGAAGCTGGTTTTGTTTGATTTTGATGGTACCTTGACCCATCAAGATATGTTCACCAAATTTATTATCTACTCAGCCAC
GCCGGTACGATTAGTGCTTGGCGTGATGTTTATGTCTCCCCTTTATCTGTTGTACCGCTTAGGCTTGATCCCCGCGCGAA
AGCTTAGGCCCTTGGTGAGTTTTTTTGCCTTTGCTGGCCGCAATAAGCTTGCTGTCGATGTCATTGGGCGTGCTTATGCT
GACCAGGTTATTTCTAAGCATATTCGACTAGATGCAATGCAAACACTCAAACAACATCAAGATGATGGTGCCACCATTGT
CTTGGTCTCAGCTTCGCTCGATCTCTACCTTCGGCCTTGGTGTCAGATGATGAATATCCAGCTTATCTGTAGCGAAATGG
CGAGTCAGGGCAAGCGTTATAGCGGTTATTACAGCGCAGGAGATTGCAGCTGCAGCGCTAAGGCCTACAAGGTATCGCAG
CAGTTTGACTTAAGTGCTTTTAGCCAAATCTACGCCTATGGTGATACCAAAGAAGATCTTGCCATGTTGGCACTGGCCGA
CAAAGCTTTTATGCAAGGCGTCGAGCAGTAA

Upstream 100 bases:

>100_bases
GGTCATGATGAACAGCTAAAGCTGGTGGATATTATCGAAGAGGAAATCGCTTAAAAGCTGTAGAATACTCGCTATTGTTC
TTGCCGCTAGGGAGAAAGAC

Downstream 100 bases:

>100_bases
GTCTCTGCTTTAATTTTTAGCCCTAAACCACCTTCTTCAGAAGGTGGATTCTTTACATTCCGTTTATTTCAAGCATCTTT
GCCATGGGTAGCCGTAATGA

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MKLVLFDFDGTLTHQDMFTKFIIYSATPVRLVLGVMFMSPLYLLYRLGLIPARKLRPLVSFFAFAGRNKLAVDVIGRAYA
DQVISKHIRLDAMQTLKQHQDDGATIVLVSASLDLYLRPWCQMMNIQLICSEMASQGKRYSGYYSAGDCSCSAKAYKVSQ
QFDLSAFSQIYAYGDTKEDLAMLALADKAFMQGVEQ

Sequences:

>Translated_196_residues
MKLVLFDFDGTLTHQDMFTKFIIYSATPVRLVLGVMFMSPLYLLYRLGLIPARKLRPLVSFFAFAGRNKLAVDVIGRAYA
DQVISKHIRLDAMQTLKQHQDDGATIVLVSASLDLYLRPWCQMMNIQLICSEMASQGKRYSGYYSAGDCSCSAKAYKVSQ
QFDLSAFSQIYAYGDTKEDLAMLALADKAFMQGVEQ
>Mature_196_residues
MKLVLFDFDGTLTHQDMFTKFIIYSATPVRLVLGVMFMSPLYLLYRLGLIPARKLRPLVSFFAFAGRNKLAVDVIGRAYA
DQVISKHIRLDAMQTLKQHQDDGATIVLVSASLDLYLRPWCQMMNIQLICSEMASQGKRYSGYYSAGDCSCSAKAYKVSQ
QFDLSAFSQIYAYGDTKEDLAMLALADKAFMQGVEQ

Specific function: Unknown

COG id: COG0560

COG function: function code E; Phosphoserine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006383
- InterPro:   IPR006385 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 22048; Mature: 22048

Theoretical pI: Translated: 8.57; Mature: 8.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVLFDFDGTLTHQDMFTKFIIYSATPVRLVLGVMFMSPLYLLYRLGLIPARKLRPLVS
CEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FFAFAGRNKLAVDVIGRAYADQVISKHIRLDAMQTLKQHQDDGATIVLVSASLDLYLRPW
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH
CQMMNIQLICSEMASQGKRYSGYYSAGDCSCSAKAYKVSQQFDLSAFSQIYAYGDTKEDL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHH
AMLALADKAFMQGVEQ
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLVLFDFDGTLTHQDMFTKFIIYSATPVRLVLGVMFMSPLYLLYRLGLIPARKLRPLVS
CEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
FFAFAGRNKLAVDVIGRAYADQVISKHIRLDAMQTLKQHQDDGATIVLVSASLDLYLRPW
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH
CQMMNIQLICSEMASQGKRYSGYYSAGDCSCSAKAYKVSQQFDLSAFSQIYAYGDTKEDL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCHHHH
AMLALADKAFMQGVEQ
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11169108 [H]