| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963027
Identifier: 157963027
GI number: 157963027
Start: 3935332
End: 3936117
Strand: Reverse
Name: 157963027
Synonym: Spea_3210
Alternate gene names: NA
Gene position: 3936117-3935332 (Counterclockwise)
Preceding gene: 157963028
Following gene: 157963024
Centisome position: 76.07
GC content: 45.93
Gene sequence:
>786_bases ATGAAAAACTCTATTTTAAAAGGCTTACTGCTGAGTCTGGTTACCCTACTGAGTCTGGTTACCCTACTGAGTCTGACATT ATCGGTACAAGCCGCTGAGGCTAAGCCAGACTCATTAGCCGATGTCTGGGTGATGATCCCTAATCCCGGTCAAGAAGCGC AATTTGAGACAGCCTTTAAAAAGCACATTCAATTTCGCGCAGAGAAAGGTGACGCTAGAGACTGGAAAGTCTATCGGCCG GTGATAGGAACAAGAATGGATCGTTATATCGTTAGATATTGCTGTACCAAATGGAATGATGTCGATGCATACCAAAAATG GCAGTCTGATAACAAGATACTCGAGCATTGGTACGCCAATGTGGATCAGTACATTGCGCGCTACGAGCACTTCTACACTC GAGTCGACTTTGCCAATAGTCATTGGCCAGAAGAGCAAGCTTATCGCTACTTTGCGGTGACGGATTATCGCGTCAAGATG GGCAGTTGGAGAGACGTTGAAGCGATGAAGAAAGTGCTCAGTGACAGTGCTAAAGCAATGAAGTGGCCATATTCTTGGTC TTGGGGGCAACGCATCGGCGGCAAGGGCGGCTTAAGCTTAGTGATCCCTTATAAAAATTATGCCGAAATGACACCACCGG ATAGCTCCTTTGCACAGGCATTAGCCAAACATATGGGCAATGAGGGAAAAGCTGAGGAGCTTTTAGAAGATTGGTCGGAA AACTTTAAGTCGACGACTTATACCGTCTATCGTTTAGTGGATGAGATGTCGATGCAGTCTAAATAG
Upstream 100 bases:
>100_bases AGAATAACTATGCTCTTCACTCGTTGCCTTGTCTCAGTGCCGCTAAACTCTCGCTGAGCGACCAAATCTTTATACTGATT GGTATAAAAGGATAGATGTA
Downstream 100 bases:
>100_bases CTCTGGTAAATAGCTTTTATAAATAGCGCGAATAATCTAGCTCTACAAAGATGAAAGCTAATACCAATCAGTACTAGCTT TCATCTTTTACTCTAGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MKNSILKGLLLSLVTLLSLVTLLSLTLSVQAAEAKPDSLADVWVMIPNPGQEAQFETAFKKHIQFRAEKGDARDWKVYRP VIGTRMDRYIVRYCCTKWNDVDAYQKWQSDNKILEHWYANVDQYIARYEHFYTRVDFANSHWPEEQAYRYFAVTDYRVKM GSWRDVEAMKKVLSDSAKAMKWPYSWSWGQRIGGKGGLSLVIPYKNYAEMTPPDSSFAQALAKHMGNEGKAEELLEDWSE NFKSTTYTVYRLVDEMSMQSK
Sequences:
>Translated_261_residues MKNSILKGLLLSLVTLLSLVTLLSLTLSVQAAEAKPDSLADVWVMIPNPGQEAQFETAFKKHIQFRAEKGDARDWKVYRP VIGTRMDRYIVRYCCTKWNDVDAYQKWQSDNKILEHWYANVDQYIARYEHFYTRVDFANSHWPEEQAYRYFAVTDYRVKM GSWRDVEAMKKVLSDSAKAMKWPYSWSWGQRIGGKGGLSLVIPYKNYAEMTPPDSSFAQALAKHMGNEGKAEELLEDWSE NFKSTTYTVYRLVDEMSMQSK >Mature_261_residues MKNSILKGLLLSLVTLLSLVTLLSLTLSVQAAEAKPDSLADVWVMIPNPGQEAQFETAFKKHIQFRAEKGDARDWKVYRP VIGTRMDRYIVRYCCTKWNDVDAYQKWQSDNKILEHWYANVDQYIARYEHFYTRVDFANSHWPEEQAYRYFAVTDYRVKM GSWRDVEAMKKVLSDSAKAMKWPYSWSWGQRIGGKGGLSLVIPYKNYAEMTPPDSSFAQALAKHMGNEGKAEELLEDWSE NFKSTTYTVYRLVDEMSMQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30381; Mature: 30381
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNSILKGLLLSLVTLLSLVTLLSLTLSVQAAEAKPDSLADVWVMIPNPGQEAQFETAFK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH KHIQFRAEKGDARDWKVYRPVIGTRMDRYIVRYCCTKWNDVDAYQKWQSDNKILEHWYAN HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHH VDQYIARYEHFYTRVDFANSHWPEEQAYRYFAVTDYRVKMGSWRDVEAMKKVLSDSAKAM HHHHHHHHHHHHHHHCCCCCCCCHHHCEEEEEEEEEEEECCCCCCHHHHHHHHHCCHHHH KWPYSWSWGQRIGGKGGLSLVIPYKNYAEMTPPDSSFAQALAKHMGNEGKAEELLEDWSE CCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH NFKSTTYTVYRLVDEMSMQSK HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKNSILKGLLLSLVTLLSLVTLLSLTLSVQAAEAKPDSLADVWVMIPNPGQEAQFETAFK CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHHHHHHH KHIQFRAEKGDARDWKVYRPVIGTRMDRYIVRYCCTKWNDVDAYQKWQSDNKILEHWYAN HHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHH VDQYIARYEHFYTRVDFANSHWPEEQAYRYFAVTDYRVKMGSWRDVEAMKKVLSDSAKAM HHHHHHHHHHHHHHHCCCCCCCCHHHCEEEEEEEEEEEECCCCCCHHHHHHHHHCCHHHH KWPYSWSWGQRIGGKGGLSLVIPYKNYAEMTPPDSSFAQALAKHMGNEGKAEELLEDWSE CCCCCCCHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHH NFKSTTYTVYRLVDEMSMQSK HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA