| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is abgT [H]
Identifier: 157962937
GI number: 157962937
Start: 3822410
End: 3823972
Strand: Reverse
Name: abgT [H]
Synonym: Spea_3120
Alternate gene names: 157962937
Gene position: 3823972-3822410 (Counterclockwise)
Preceding gene: 157962938
Following gene: 157962936
Centisome position: 73.9
GC content: 46.26
Gene sequence:
>1563_bases ATGAAAGCAGATAAACAGGCGCTTGGAGAACAAGGGCCACAAGGGATGTTAGGTAAAGCATTAGACAGCATTGAAAGGGT CGGCAATAAGTTACCGGATCCTGCAATGCTATTTTTAATTTTGATGTTTGCCGTATGGGCACTATCAGCGTTGCTATCGG GGGTGAGCTTTGAGGCCATCGACCCGACGACTAACTCTCCAATTGTGGTTCATAACCTACTAACCGCAGAAGCGCTAACT AAGTTCTTAACCTCGATGGTAACGACGTTCACGGCATTCGCTCCTTTAGGTGTGGTGTTGGTGGCCATGCTAGGTGTGGG CGTAGCTGAGCATTCAGGCTTTATTAACACTGCGCTAAAACGCATGTTAAAAATCACCCCGGCTAAATTTTTAACTCCGG CAGTGGTTTTGGTCGGTATTATCTCTCACACCGCAACCGATGCGGGTTATGTGGTGGTTATTCCTCTTGCTGGCGTGATC TTCTTTACCGTTGGTCGCCATCCTCTAGCGGGTATAGCCGCAGCGTTTGCTGGTGTGTCAGGTGGTTTTTGCGCCAACTT TATCCCGTCAGGAATTGACCCATTACTGCAAAGCTTTACCCAAGCTGCGGCACAAATTGTTGACCCGACAATTGAAGTCA ACCCACTGAACAACTGGTTCTTCGCGGCATCGTCATGTATCCCTATTACGTTAGTTATCTGGTATCTAACAGATAAAGTA TTGGAGCCTCGCTTAAACCGCACTCACAAGGTTAACCGCGAAGAGGTGGATCTTCCGGCGATGGAAGAGGAGAAGCCGTC TGAGATTAAAGCATTCCGCGTTGCTAGCTTAGTGATGGTTGTTGCAATTGCAGCTTTCTTCTCATTAACTGTGCCAGAGA CTTCAACACTGCGTGATGCGAACGGTTCATTGACGAGCTTTAAGGCACCTTTGATGCAGTCAATTGTGCCGCTGATCTTT ATCTTCTTTATGTTACCTGGCCTCGTATATGGCTACATGACTGGTGCCTTTAAAACATCAGGGGATGTTGTACAGGCGAT GTCTAAGTCGATGAGTGGCATGTCTCATTACATCGTCATGGCATTTTTCTGTGCTCAGTTTGTAGCAGCATTTTCGGCAT CTAACCTCGGTGCTTTAATCGCAGTTGAAGGTGCTGGTGGATTAAAAGCCTTAAACTTACCGGCTGAAATTACCGTAGTG GGTATGATTATCCTAGTTGGCTTTGTGAACTTGTTTGTGGGCTCATCATCGGCTAAGTGGGCTTTGATTGGTCCAGTTCT AGTGCCTATGTTGATGCAGCTTAATATCAGTCCAGATCTATCTCAGGCGGCATACCGCGTAGGTGATTCGAGCTCTAATA TTATTACGCCGCTGATGCCATACTTTCCGTTAGTGGTAGTTTACTGTCAACGCTATGTGAAGAATATCGGTATTGGTACC TTAATCTCTATGATGCTGCCGTTTAGCTTAGCGTTAATGTCTATATGGAGTGTTTGGTTGTTGGCTTACTGGGCTCTTGG TTTCCCATTGGGCTTAGGTGCAAGTTATACCTATGGTTTGTAA
Upstream 100 bases:
>100_bases TCTAGTAGGTTATAAAAAATACTCGACGTTAAGCAGTGCTATTCGCTCAGTTTGGTAATAATAGTCAGTTTAATGTGGGA AAACATAAATAGGTTGAATG
Downstream 100 bases:
>100_bases GCGTTTAACATCCGTTGAAAAGCACTGAGAAGGCCAAGTCTATGACTTGGCTTTTTTTTGCGGCGGTTTTTTGGCCGTTA TTTCACAGTATCACTAAGAG
Product: putative transporter AbgT
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 520; Mature: 520
Protein sequence:
>520_residues MKADKQALGEQGPQGMLGKALDSIERVGNKLPDPAMLFLILMFAVWALSALLSGVSFEAIDPTTNSPIVVHNLLTAEALT KFLTSMVTTFTAFAPLGVVLVAMLGVGVAEHSGFINTALKRMLKITPAKFLTPAVVLVGIISHTATDAGYVVVIPLAGVI FFTVGRHPLAGIAAAFAGVSGGFCANFIPSGIDPLLQSFTQAAAQIVDPTIEVNPLNNWFFAASSCIPITLVIWYLTDKV LEPRLNRTHKVNREEVDLPAMEEEKPSEIKAFRVASLVMVVAIAAFFSLTVPETSTLRDANGSLTSFKAPLMQSIVPLIF IFFMLPGLVYGYMTGAFKTSGDVVQAMSKSMSGMSHYIVMAFFCAQFVAAFSASNLGALIAVEGAGGLKALNLPAEITVV GMIILVGFVNLFVGSSSAKWALIGPVLVPMLMQLNISPDLSQAAYRVGDSSSNIITPLMPYFPLVVVYCQRYVKNIGIGT LISMMLPFSLALMSIWSVWLLAYWALGFPLGLGASYTYGL
Sequences:
>Translated_520_residues MKADKQALGEQGPQGMLGKALDSIERVGNKLPDPAMLFLILMFAVWALSALLSGVSFEAIDPTTNSPIVVHNLLTAEALT KFLTSMVTTFTAFAPLGVVLVAMLGVGVAEHSGFINTALKRMLKITPAKFLTPAVVLVGIISHTATDAGYVVVIPLAGVI FFTVGRHPLAGIAAAFAGVSGGFCANFIPSGIDPLLQSFTQAAAQIVDPTIEVNPLNNWFFAASSCIPITLVIWYLTDKV LEPRLNRTHKVNREEVDLPAMEEEKPSEIKAFRVASLVMVVAIAAFFSLTVPETSTLRDANGSLTSFKAPLMQSIVPLIF IFFMLPGLVYGYMTGAFKTSGDVVQAMSKSMSGMSHYIVMAFFCAQFVAAFSASNLGALIAVEGAGGLKALNLPAEITVV GMIILVGFVNLFVGSSSAKWALIGPVLVPMLMQLNISPDLSQAAYRVGDSSSNIITPLMPYFPLVVVYCQRYVKNIGIGT LISMMLPFSLALMSIWSVWLLAYWALGFPLGLGASYTYGL >Mature_520_residues MKADKQALGEQGPQGMLGKALDSIERVGNKLPDPAMLFLILMFAVWALSALLSGVSFEAIDPTTNSPIVVHNLLTAEALT KFLTSMVTTFTAFAPLGVVLVAMLGVGVAEHSGFINTALKRMLKITPAKFLTPAVVLVGIISHTATDAGYVVVIPLAGVI FFTVGRHPLAGIAAAFAGVSGGFCANFIPSGIDPLLQSFTQAAAQIVDPTIEVNPLNNWFFAASSCIPITLVIWYLTDKV LEPRLNRTHKVNREEVDLPAMEEEKPSEIKAFRVASLVMVVAIAAFFSLTVPETSTLRDANGSLTSFKAPLMQSIVPLIF IFFMLPGLVYGYMTGAFKTSGDVVQAMSKSMSGMSHYIVMAFFCAQFVAAFSASNLGALIAVEGAGGLKALNLPAEITVV GMIILVGFVNLFVGSSSAKWALIGPVLVPMLMQLNISPDLSQAAYRVGDSSSNIITPLMPYFPLVVVYCQRYVKNIGIGT LISMMLPFSLALMSIWSVWLLAYWALGFPLGLGASYTYGL
Specific function: Essential for aminobenzoyl-glutamate utilization. May transport aminobenzoyl-glutamate into the cell. Seems also to increase the sensitivity to low levels of aminobenzoyl-glutamate. Sufficient to confer aminobenzoyl-glutamate utilization phenotype [H]
COG id: COG2978
COG function: function code H; Putative p-aminobenzoyl-glutamate transporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081879, Length=496, Percent_Identity=36.0887096774194, Blast_Score=323, Evalue=1e-89,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004697 - InterPro: IPR011540 [H]
Pfam domain/function: PF03806 ABG_transport [H]
EC number: NA
Molecular weight: Translated: 55458; Mature: 55458
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKADKQALGEQGPQGMLGKALDSIERVGNKLPDPAMLFLILMFAVWALSALLSGVSFEAI CCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE DPTTNSPIVVHNLLTAEALTKFLTSMVTTFTAFAPLGVVLVAMLGVGVAEHSGFINTALK CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHH RMLKITPAKFLTPAVVLVGIISHTATDAGYVVVIPLAGVIFFTVGRHPLAGIAAAFAGVS HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCC GGFCANFIPSGIDPLLQSFTQAAAQIVDPTIEVNPLNNWFFAASSCIPITLVIWYLTDKV CCHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHH LEPRLNRTHKVNREEVDLPAMEEEKPSEIKAFRVASLVMVVAIAAFFSLTVPETSTLRDA HHHHHCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NGSLTSFKAPLMQSIVPLIFIFFMLPGLVYGYMTGAFKTSGDVVQAMSKSMSGMSHYIVM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH AFFCAQFVAAFSASNLGALIAVEGAGGLKALNLPAEITVVGMIILVGFVNLFVGSSSAKW HHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE ALIGPVLVPMLMQLNISPDLSQAAYRVGDSSSNIITPLMPYFPLVVVYCQRYVKNIGIGT EHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH LISMMLPFSLALMSIWSVWLLAYWALGFPLGLGASYTYGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKADKQALGEQGPQGMLGKALDSIERVGNKLPDPAMLFLILMFAVWALSALLSGVSFEAI CCCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE DPTTNSPIVVHNLLTAEALTKFLTSMVTTFTAFAPLGVVLVAMLGVGVAEHSGFINTALK CCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHH RMLKITPAKFLTPAVVLVGIISHTATDAGYVVVIPLAGVIFFTVGRHPLAGIAAAFAGVS HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHCCC GGFCANFIPSGIDPLLQSFTQAAAQIVDPTIEVNPLNNWFFAASSCIPITLVIWYLTDKV CCHHHHHCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHH LEPRLNRTHKVNREEVDLPAMEEEKPSEIKAFRVASLVMVVAIAAFFSLTVPETSTLRDA HHHHHCHHHCCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC NGSLTSFKAPLMQSIVPLIFIFFMLPGLVYGYMTGAFKTSGDVVQAMSKSMSGMSHYIVM CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH AFFCAQFVAAFSASNLGALIAVEGAGGLKALNLPAEITVVGMIILVGFVNLFVGSSSAKW HHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCE ALIGPVLVPMLMQLNISPDLSQAAYRVGDSSSNIITPLMPYFPLVVVYCQRYVKNIGIGT EHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH LISMMLPFSLALMSIWSVWLLAYWALGFPLGLGASYTYGL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9829935; 9097039; 9278503; 2825131; 7567469 [H]