| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157962936
Identifier: 157962936
GI number: 157962936
Start: 3821350
End: 3822225
Strand: Reverse
Name: 157962936
Synonym: Spea_3119
Alternate gene names: NA
Gene position: 3822225-3821350 (Counterclockwise)
Preceding gene: 157962937
Following gene: 157962931
Centisome position: 73.87
GC content: 46.58
Gene sequence:
>876_bases ATGGCATGGATATTATTCACCTTTTTAGCCGCATTAATGCAAGCATGGCGCAATGCCTTTCAAAGTCAGCTAAGTAAGGA TGTTAATATCGCCGGAGTGACCTTGGCTCGGTTTCTGTGGGCAACCCCAATTGCGATTATCTACCTGTTAGGCCTCTATG TTTGGCAGCCTGTTGGACTTCCGTTTATCACCCTTAAATTCACAGCTTATGTACTTGGTGCAGCGGCGATGCAGATCTTG GCCACGGCTTTGATGGTGAAGCTTTTTAAAATGAAGAACTTTGCCGTAGGGGCGGGCTTGGCTAAGAGTGAGGCCTTAGT CGCAGCGATTCTCGGGGTGTTGTTTTTCGGAACGCATTTATCATTACTTGGTTGGCTAGGCGTGCTCATTGGTGTAATAG CCATATTTATGATGAGCAGCAAACAGGGATTTAGGCAGCTTTCGTTATCCACGATATTGCTTGGGCTTGCTTGTGGTACT GCTTTTGCCTTGACGTCTCTTTGGGTTAGGGAGGCGAGCCTTAATCTCGATCTGCCATTTCCTCACAGAGCTGCCTGGGT GCTGCTGTTTGTCATTGCGATTCAGACGTCAGTGCTATTGATATACTCCTATGTCGTGGATAAAAACACCATCGATAGTC TACTGCAAAGGCCAAAGCTGACTCTACTCACCAGTGTCACAAGCTGTCTGGGTTCAATCGGTTGGTTTAGTGCCATGTCG TTGCAGGCGGTGCCCTATGTTAAGACACTTGGCCAGGTAGAGGTGTTCTTTACCTTGCTTATTGCCACGTTCTGGCTTAA AAATAAGGTGGAAATTAAAGATATGTTAGGGCTAATTCTTATCGCAATTGCAGCGATACTGGTAATGTGGGGTTAG
Upstream 100 bases:
>100_bases ACAGTATCACTAAGAGTTATTGTCAGTATCTAAGACTAATTCCCCCTTAAACTCGTTATGGCAGGCATAATAGTGTTTTG ATTTTTGGCGCTCACTCAAT
Downstream 100 bases:
>100_bases TTATTACTTACTTTTCGTTCTGTGTTTGAGGCGTTTTTCGCAGAGAGCAATAGATAACTGCGCACATAAAACCCCAAGGG TCGCGCCAGCAAGTAAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MAWILFTFLAALMQAWRNAFQSQLSKDVNIAGVTLARFLWATPIAIIYLLGLYVWQPVGLPFITLKFTAYVLGAAAMQIL ATALMVKLFKMKNFAVGAGLAKSEALVAAILGVLFFGTHLSLLGWLGVLIGVIAIFMMSSKQGFRQLSLSTILLGLACGT AFALTSLWVREASLNLDLPFPHRAAWVLLFVIAIQTSVLLIYSYVVDKNTIDSLLQRPKLTLLTSVTSCLGSIGWFSAMS LQAVPYVKTLGQVEVFFTLLIATFWLKNKVEIKDMLGLILIAIAAILVMWG
Sequences:
>Translated_291_residues MAWILFTFLAALMQAWRNAFQSQLSKDVNIAGVTLARFLWATPIAIIYLLGLYVWQPVGLPFITLKFTAYVLGAAAMQIL ATALMVKLFKMKNFAVGAGLAKSEALVAAILGVLFFGTHLSLLGWLGVLIGVIAIFMMSSKQGFRQLSLSTILLGLACGT AFALTSLWVREASLNLDLPFPHRAAWVLLFVIAIQTSVLLIYSYVVDKNTIDSLLQRPKLTLLTSVTSCLGSIGWFSAMS LQAVPYVKTLGQVEVFFTLLIATFWLKNKVEIKDMLGLILIAIAAILVMWG >Mature_290_residues AWILFTFLAALMQAWRNAFQSQLSKDVNIAGVTLARFLWATPIAIIYLLGLYVWQPVGLPFITLKFTAYVLGAAAMQILA TALMVKLFKMKNFAVGAGLAKSEALVAAILGVLFFGTHLSLLGWLGVLIGVIAIFMMSSKQGFRQLSLSTILLGLACGTA FALTSLWVREASLNLDLPFPHRAAWVLLFVIAIQTSVLLIYSYVVDKNTIDSLLQRPKLTLLTSVTSCLGSIGWFSAMSL QAVPYVKTLGQVEVFFTLLIATFWLKNKVEIKDMLGLILIAIAAILVMWG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31856; Mature: 31725
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWILFTFLAALMQAWRNAFQSQLSKDVNIAGVTLARFLWATPIAIIYLLGLYVWQPVGL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PFITLKFTAYVLGAAAMQILATALMVKLFKMKNFAVGAGLAKSEALVAAILGVLFFGTHL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SLLGWLGVLIGVIAIFMMSSKQGFRQLSLSTILLGLACGTAFALTSLWVREASLNLDLPF HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PHRAAWVLLFVIAIQTSVLLIYSYVVDKNTIDSLLQRPKLTLLTSVTSCLGSIGWFSAMS CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LQAVPYVKTLGQVEVFFTLLIATFWLKNKVEIKDMLGLILIAIAAILVMWG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AWILFTFLAALMQAWRNAFQSQLSKDVNIAGVTLARFLWATPIAIIYLLGLYVWQPVGL HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PFITLKFTAYVLGAAAMQILATALMVKLFKMKNFAVGAGLAKSEALVAAILGVLFFGTHL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH SLLGWLGVLIGVIAIFMMSSKQGFRQLSLSTILLGLACGTAFALTSLWVREASLNLDLPF HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC PHRAAWVLLFVIAIQTSVLLIYSYVVDKNTIDSLLQRPKLTLLTSVTSCLGSIGWFSAMS CHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LQAVPYVKTLGQVEVFFTLLIATFWLKNKVEIKDMLGLILIAIAAILVMWG HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA