| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962926
Identifier: 157962926
GI number: 157962926
Start: 3811523
End: 3812587
Strand: Reverse
Name: 157962926
Synonym: Spea_3109
Alternate gene names: NA
Gene position: 3812587-3811523 (Counterclockwise)
Preceding gene: 157962931
Following gene: 157962925
Centisome position: 73.68
GC content: 45.07
Gene sequence:
>1065_bases ATGACCGAGAATAATCTGCCATGGCTCCCCAATATGCTCACCAGTTCAGCCGCTCCCCAAAGCTTAATAGATGAGTATGG TTGTGCTGTTTACGGACATTTCGATGGCCCCGTATCTAACTTGGCTGTAGAGCAGTTCAAATACTTTAATGAGATGGACA AGCCGGCCTCAAGCTGGGCTAAGCATTTTGACTATAAGCAGTTCCAGTTTGTTAGCATCGTCACTCCCCATTACATTATT GGTGTAGCACTTGCGGATATTCGTTACGTGGGCAGTGCTTTCTGTTATCTCTATGATATTAAAGCTAACCAGCTAATAGA AACGAGCTGGCTTAAGCCATTAGGCTTGGGCTATCAGATGTCAGATTCACCCATGCAGGGAAAGGCTAAGATAAAAGGTG GCCAGGGCCAAGTTGAGTTCGATATCGAACAAGGACTGTGGCGTGTCAGGCTCAATACCTTAGGCATTGAGGCTGAATTA AGTTTACAACCAGAAGTGCTCAGCCTACCTATGGCGATGTGTAACCCAACGGGGTATAGCGGCTGGACATATACCCAAAA ACATAATGCCCTAAAAGTGACGGGGAGCTTAGTCATCAATCATGAACCACAACCATTACAAAGAGTCACAGCTGGCTACG ATTTTAGTGCAGGCTATATGCGCAGAGAAACCAGTTGGCGCTGGGCGAGTATTAATAGTCTAACGGAGCATGGCAGCTTA GGGCTTAATCTAGCTGCTGGTGTAAATGAGACGGGCTGTCATGAGAATGTGTTTTGGCATAACGGCGAAAGACATCTTCT TGGCCCGGTGCATTTCGAGTTTACTCGTCACAGAGATAAAACGAAATCGGCAGCAAGCTGGCGAGTCTACAGTGCTAATG GCCAAGTGGAACTCACTTTTACACCTAAAAGTTGTCGCCAAGAGAAACTAAACCTTTGGCTATTAAAGAGTAATTTCAGG CAGTATTTAGGGCGTTTTGATGGTTGTATCATTGATAATTTTGGTAATAAACATCAACTCGATAATGTTTTTGGGCTGAC GGAAGATCACTTTGCTCGTTGGTAG
Upstream 100 bases:
>100_bases GTATTTACAGTTTGATAACAAAAGTTCTCTGGGCAGCTTTTAACCTGAGTCAGTTCAAGTTAGAGTAAAAGGTCGAATCA GTATCAGGAACTCAAGGTTT
Downstream 100 bases:
>100_bases TCTCGTTTGATGGCTAGAGTCATAAACCAAAATAAAAAACGATTAAAGCGGTGAAAAGTGGCGAGACATATAAGTCGAGG CCCCCAAGGATAAAAAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTENNLPWLPNMLTSSAAPQSLIDEYGCAVYGHFDGPVSNLAVEQFKYFNEMDKPASSWAKHFDYKQFQFVSIVTPHYII GVALADIRYVGSAFCYLYDIKANQLIETSWLKPLGLGYQMSDSPMQGKAKIKGGQGQVEFDIEQGLWRVRLNTLGIEAEL SLQPEVLSLPMAMCNPTGYSGWTYTQKHNALKVTGSLVINHEPQPLQRVTAGYDFSAGYMRRETSWRWASINSLTEHGSL GLNLAAGVNETGCHENVFWHNGERHLLGPVHFEFTRHRDKTKSAASWRVYSANGQVELTFTPKSCRQEKLNLWLLKSNFR QYLGRFDGCIIDNFGNKHQLDNVFGLTEDHFARW
Sequences:
>Translated_354_residues MTENNLPWLPNMLTSSAAPQSLIDEYGCAVYGHFDGPVSNLAVEQFKYFNEMDKPASSWAKHFDYKQFQFVSIVTPHYII GVALADIRYVGSAFCYLYDIKANQLIETSWLKPLGLGYQMSDSPMQGKAKIKGGQGQVEFDIEQGLWRVRLNTLGIEAEL SLQPEVLSLPMAMCNPTGYSGWTYTQKHNALKVTGSLVINHEPQPLQRVTAGYDFSAGYMRRETSWRWASINSLTEHGSL GLNLAAGVNETGCHENVFWHNGERHLLGPVHFEFTRHRDKTKSAASWRVYSANGQVELTFTPKSCRQEKLNLWLLKSNFR QYLGRFDGCIIDNFGNKHQLDNVFGLTEDHFARW >Mature_353_residues TENNLPWLPNMLTSSAAPQSLIDEYGCAVYGHFDGPVSNLAVEQFKYFNEMDKPASSWAKHFDYKQFQFVSIVTPHYIIG VALADIRYVGSAFCYLYDIKANQLIETSWLKPLGLGYQMSDSPMQGKAKIKGGQGQVEFDIEQGLWRVRLNTLGIEAELS LQPEVLSLPMAMCNPTGYSGWTYTQKHNALKVTGSLVINHEPQPLQRVTAGYDFSAGYMRRETSWRWASINSLTEHGSLG LNLAAGVNETGCHENVFWHNGERHLLGPVHFEFTRHRDKTKSAASWRVYSANGQVELTFTPKSCRQEKLNLWLLKSNFRQ YLGRFDGCIIDNFGNKHQLDNVFGLTEDHFARW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40204; Mature: 40073
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTENNLPWLPNMLTSSAAPQSLIDEYGCAVYGHFDGPVSNLAVEQFKYFNEMDKPASSWA CCCCCCCCCCHHHHCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHH KHFDYKQFQFVSIVTPHYIIGVALADIRYVGSAFCYLYDIKANQLIETSWLKPLGLGYQM HHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEHHHCCCHHCCCEEE SDSPMQGKAKIKGGQGQVEFDIEQGLWRVRLNTLGIEAELSLQPEVLSLPMAMCNPTGYS CCCCCCCCEEEECCCCCEEEECCCCEEEEEEEEECEEEEECCCCHHHHCCHHHCCCCCCC GWTYTQKHNALKVTGSLVINHEPQPLQRVTAGYDFSAGYMRRETSWRWASINSLTEHGSL CCEEEECCCEEEEEEEEEECCCCCHHHHHHCCCCCCCCCEECCCCCEEEECCHHHHCCCC GLNLAAGVNETGCHENVFWHNGERHLLGPVHFEFTRHRDKTKSAASWRVYSANGQVELTF CEEEECCCCCCCCCCCCEEECCCEEEECCEEEEEHHCCCCCCCCCEEEEEECCCEEEEEE TPKSCRQEKLNLWLLKSNFRQYLGRFDGCIIDNFGNKHQLDNVFGLTEDHFARW CCHHHHHHHCEEEEEHHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCHHHHCCC >Mature Secondary Structure TENNLPWLPNMLTSSAAPQSLIDEYGCAVYGHFDGPVSNLAVEQFKYFNEMDKPASSWA CCCCCCCCCHHHHCCCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHH KHFDYKQFQFVSIVTPHYIIGVALADIRYVGSAFCYLYDIKANQLIETSWLKPLGLGYQM HHCCCCCEEEEEECCCHHHHHHHHHHHHHHCCEEEEEEECCCCCEEHHHCCCHHCCCEEE SDSPMQGKAKIKGGQGQVEFDIEQGLWRVRLNTLGIEAELSLQPEVLSLPMAMCNPTGYS CCCCCCCCEEEECCCCCEEEECCCCEEEEEEEEECEEEEECCCCHHHHCCHHHCCCCCCC GWTYTQKHNALKVTGSLVINHEPQPLQRVTAGYDFSAGYMRRETSWRWASINSLTEHGSL CCEEEECCCEEEEEEEEEECCCCCHHHHHHCCCCCCCCCEECCCCCEEEECCHHHHCCCC GLNLAAGVNETGCHENVFWHNGERHLLGPVHFEFTRHRDKTKSAASWRVYSANGQVELTF CEEEECCCCCCCCCCCCEEECCCEEEECCEEEEEHHCCCCCCCCCEEEEEECCCEEEEEE TPKSCRQEKLNLWLLKSNFRQYLGRFDGCIIDNFGNKHQLDNVFGLTEDHFARW CCHHHHHHHCEEEEEHHHHHHHHHHCCCEEEECCCCCCCCCHHHCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA