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The map label for this gene is rimP [H]

Identifier: 157962880

GI number: 157962880

Start: 3757370

End: 3757825

Strand: Reverse

Name: rimP [H]

Synonym: Spea_3062

Alternate gene names: 157962880

Gene position: 3757825-3757370 (Counterclockwise)

Preceding gene: 157962881

Following gene: 157962879

Centisome position: 72.62

GC content: 42.98

Gene sequence:

>456_bases
TTGGCTACATTAGAACGCAAACTGGTAGAGATGCTCAAAGCGCCAGTTGAAGCATTAGGCCACAAGCTTTGGGGTCTGGA
ATATATTCAAGCAGGCAAGCATTCTATCTTGCGTCTATATATAGACAACGAAAAAGGCATCTTCATTGAAGATTGCGCCG
AAGCAAGCCGCCAAGTCAGTGCTGTTATGGACGTTGAAGATCCAATCTCAACGGAATACACATTAGAAGTTTCTTCTCCT
GGTGTAGATAGACCTTTGTTTACTGCTGAGCAGTACCAGGCCTACATTGGTGAGACTGTAAAAGTACAACTAACGATGCC
TGTTGCAGGCAGTCGTAATTTAAAAGGCACTGTTACTGGCGTAGATGGGCAAATGCTTAATCTGTCGGTAGATGGGAATG
AACTTATCGTTGCTTTGGATAATATCCGTAAAGGCAACTTAATCGCTAAGTTTTGA

Upstream 100 bases:

>100_bases
GTCATTACGGGGTTTTTTGTTATCTGGAACTTATAAAACGGCCACTTTTGTGGCGTGTACTGGGGCTATTAGGCCCTTTT
TTGTTTTTCTGGGGGTAACC

Downstream 100 bases:

>100_bases
TGAATTCAAGGTGAACGAGGCAAGACAATGAATAAAGAGATTCTGCTAGTCGCTGAGGCGGTTTCAAATGAGAAAGGTGT
ACCGCGCGAAAAGATTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MATLERKLVEMLKAPVEALGHKLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVSAVMDVEDPISTEYTLEVSSP
GVDRPLFTAEQYQAYIGETVKVQLTMPVAGSRNLKGTVTGVDGQMLNLSVDGNELIVALDNIRKGNLIAKF

Sequences:

>Translated_151_residues
MATLERKLVEMLKAPVEALGHKLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVSAVMDVEDPISTEYTLEVSSP
GVDRPLFTAEQYQAYIGETVKVQLTMPVAGSRNLKGTVTGVDGQMLNLSVDGNELIVALDNIRKGNLIAKF
>Mature_150_residues
ATLERKLVEMLKAPVEALGHKLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVSAVMDVEDPISTEYTLEVSSPG
VDRPLFTAEQYQAYIGETVKVQLTMPVAGSRNLKGTVTGVDGQMLNLSVDGNELIVALDNIRKGNLIAKF

Specific function: Required for maturation of 30S ribosomal subunits [H]

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family [H]

Homologues:

Organism=Escherichia coli, GI226510978, Length=151, Percent_Identity=54.9668874172185, Blast_Score=177, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003728 [H]

Pfam domain/function: PF02576 DUF150 [H]

EC number: NA

Molecular weight: Translated: 16610; Mature: 16479

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATLERKLVEMLKAPVEALGHKLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVS
CCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHHE
AVMDVEDPISTEYTLEVSSPGVDRPLFTAEQYQAYIGETVKVQLTMPVAGSRNLKGTVTG
EEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEE
VDGQMLNLSVDGNELIVALDNIRKGNLIAKF
CCCEEEEEEECCCEEEEEECCCCCCCEEECC
>Mature Secondary Structure 
ATLERKLVEMLKAPVEALGHKLWGLEYIQAGKHSILRLYIDNEKGIFIEDCAEASRQVS
CCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEEEEEEECCCCEEEHHHHHHHHHHE
AVMDVEDPISTEYTLEVSSPGVDRPLFTAEQYQAYIGETVKVQLTMPVAGSRNLKGTVTG
EEECCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEEEEECCCCCCCCCEEEEE
VDGQMLNLSVDGNELIVALDNIRKGNLIAKF
CCCEEEEEEECCCEEEEEECCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA