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The map label for this gene is ompK [H]

Identifier: 157962867

GI number: 157962867

Start: 3740090

End: 3740953

Strand: Reverse

Name: ompK [H]

Synonym: Spea_3049

Alternate gene names: 157962867

Gene position: 3740953-3740090 (Counterclockwise)

Preceding gene: 157962868

Following gene: 157962866

Centisome position: 72.29

GC content: 45.25

Gene sequence:

>864_bases
ATGAAAAACGTTAAAACTTTCGCTCTAGCAGCTACTGCTATTGCAGCAACAATGTCTGCACCTACATTCGCTGCTGACCG
TTCTGATCTACGTTCTGGCGATTACAGCTGGATGCAGTTCAACGCAATGTACGCTGTAAACGAACTTCCACGTTCTGACG
CTGATGATGGTGGTCATGATTATCTAGAAATGGAATTTGGCGGCCGCGCTGGCATCGTTGACCTATACGGTTATGTTGAT
GTGTTCAACTTGGCTAACAGCAGCTCAGGCGACAAAGGCGCTGGTAAGAGCAAGATGTTCATGAAATTCGCTCCTCGTTT
CTCTATCGATGCGATGACTGGTTGGGATCTTTCTGCTGGTCCAATCCAAGAAGTTTACTTCTCAACTCTATTTAACTGGG
GTGGTGGCGCTATCAGCGGTGTAGATGCTGATGGTAATGAGCACGGCGGCGACGTAAACATGTCTTTCTGGGGTCTTGGT
GCCGATGTAATGGTTCCGTGGTTAGGTAAGACTGGCATGAACCTTTATGCTACTTACGACATGAACGCTAAAGATTGGAA
CGGTTACCAGTTCTCTATGAACTGGTTCAAGCCAGTAATGAACTTCGATAACGGTTCATTCGTTTCTTTCCAAGGTTATG
TTGATTACCAGTTTGGTGCTGACGCAGTTGATGATATGTATGTTCCTACTACTTCAAGTGGTGGCGCTGCATACTTCGGT
CTACACTGGCATTCAGATAACTATGCACTTGGTTACGGTCTAAAGGCGTACCAAGATGTGTATTTAGTTAAAGATGATGG
CGGTATCGTAGGTCTTGAATCTACAGGCTTCGCACATTACTTTACTGCTACTTACAAGTTCTAA

Upstream 100 bases:

>100_bases
GAAGTTTGGCATAAATAAAGTAGAATGCGACGCCATAAAAAAGAAACGCTGACTCTTCAATAAAGAAGGGCGGCAAACCA
TAAATAAAATGGGGTTGATG

Downstream 100 bases:

>100_bases
GCATCGCTTAAAACTATTGTAAATAGACGACAGAGCCGCGATATTCGCGGCTCTATCTTACAGCTCGAATACAGTGCTTT
GAACGTTAAAATAGTAACTT

Product: nucleoside-specific channel-forming protein Tsx

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKNVKTFALAATAIAATMSAPTFAADRSDLRSGDYSWMQFNAMYAVNELPRSDADDGGHDYLEMEFGGRAGIVDLYGYVD
VFNLANSSSGDKGAGKSKMFMKFAPRFSIDAMTGWDLSAGPIQEVYFSTLFNWGGGAISGVDADGNEHGGDVNMSFWGLG
ADVMVPWLGKTGMNLYATYDMNAKDWNGYQFSMNWFKPVMNFDNGSFVSFQGYVDYQFGADAVDDMYVPTTSSGGAAYFG
LHWHSDNYALGYGLKAYQDVYLVKDDGGIVGLESTGFAHYFTATYKF

Sequences:

>Translated_287_residues
MKNVKTFALAATAIAATMSAPTFAADRSDLRSGDYSWMQFNAMYAVNELPRSDADDGGHDYLEMEFGGRAGIVDLYGYVD
VFNLANSSSGDKGAGKSKMFMKFAPRFSIDAMTGWDLSAGPIQEVYFSTLFNWGGGAISGVDADGNEHGGDVNMSFWGLG
ADVMVPWLGKTGMNLYATYDMNAKDWNGYQFSMNWFKPVMNFDNGSFVSFQGYVDYQFGADAVDDMYVPTTSSGGAAYFG
LHWHSDNYALGYGLKAYQDVYLVKDDGGIVGLESTGFAHYFTATYKF
>Mature_287_residues
MKNVKTFALAATAIAATMSAPTFAADRSDLRSGDYSWMQFNAMYAVNELPRSDADDGGHDYLEMEFGGRAGIVDLYGYVD
VFNLANSSSGDKGAGKSKMFMKFAPRFSIDAMTGWDLSAGPIQEVYFSTLFNWGGGAISGVDADGNEHGGDVNMSFWGLG
ADVMVPWLGKTGMNLYATYDMNAKDWNGYQFSMNWFKPVMNFDNGSFVSFQGYVDYQFGADAVDDMYVPTTSSGGAAYFG
LHWHSDNYALGYGLKAYQDVYLVKDDGGIVGLESTGFAHYFTATYKF

Specific function: Serves as receptor for a broad-host-range vibriophage, KVP40 [H]

COG id: COG3248

COG function: function code M; Nucleoside-binding outer membrane protein

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli tsx [H]

Homologues:

Organism=Escherichia coli, GI1786612, Length=173, Percent_Identity=32.3699421965318, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018013 [H]

Pfam domain/function: PF03502 Channel_Tsx [H]

EC number: NA

Molecular weight: Translated: 31388; Mature: 31388

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVKTFALAATAIAATMSAPTFAADRSDLRSGDYSWMQFNAMYAVNELPRSDADDGGHD
CCCCHHHHHHHHHHHHHHCCCCEECCHHHHCCCCCEEEEEEEEEEEHHCCCCCCCCCCCC
YLEMEFGGRAGIVDLYGYVDVFNLANSSSGDKGAGKSKMFMKFAPRFSIDAMTGWDLSAG
EEEEEECCCCCEEEHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCC
PIQEVYFSTLFNWGGGAISGVDADGNEHGGDVNMSFWGLGADVMVPWLGKTGMNLYATYD
CHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEEE
MNAKDWNGYQFSMNWFKPVMNFDNGSFVSFQGYVDYQFGADAVDDMYVPTTSSGGAAYFG
CCCCCCCCEEEEEHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEECCCCCCCEEEEE
LHWHSDNYALGYGLKAYQDVYLVKDDGGIVGLESTGFAHYFTATYKF
EEEECCCEEEECCCCCCCEEEEEECCCCEEEECCCCCEEEEEEEECC
>Mature Secondary Structure
MKNVKTFALAATAIAATMSAPTFAADRSDLRSGDYSWMQFNAMYAVNELPRSDADDGGHD
CCCCHHHHHHHHHHHHHHCCCCEECCHHHHCCCCCEEEEEEEEEEEHHCCCCCCCCCCCC
YLEMEFGGRAGIVDLYGYVDVFNLANSSSGDKGAGKSKMFMKFAPRFSIDAMTGWDLSAG
EEEEEECCCCCEEEHHHHHEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCCCCC
PIQEVYFSTLFNWGGGAISGVDADGNEHGGDVNMSFWGLGADVMVPWLGKTGMNLYATYD
CHHHHHHHHHHHCCCCEEECCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCEEEEEEE
MNAKDWNGYQFSMNWFKPVMNFDNGSFVSFQGYVDYQFGADAVDDMYVPTTSSGGAAYFG
CCCCCCCCEEEEEHHHHHHHCCCCCCEEEEEEEEEEECCCCCCCCEEECCCCCCCEEEEE
LHWHSDNYALGYGLKAYQDVYLVKDDGGIVGLESTGFAHYFTATYKF
EEEECCCEEEECCCCCCCEEEEEECCCCEEEECCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8586275 [H]