| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962832
Identifier: 157962832
GI number: 157962832
Start: 3694964
End: 3696343
Strand: Reverse
Name: 157962832
Synonym: Spea_3014
Alternate gene names: NA
Gene position: 3696343-3694964 (Counterclockwise)
Preceding gene: 157962833
Following gene: 157962831
Centisome position: 71.43
GC content: 47.1
Gene sequence:
>1380_bases ATGAAATACCGAACGTTGAAGATGTCTGTTGTTGCTGTGTCTTGCTCATTAGCTTTTTCTGTTAGTGCTGAGTCAATCTT GTTTACTAACGTCAATGTGTTTGATGGTAAGAAAGATGAGTTGCTAGAAAACTATCAAGTGTTAGTGGTGGATAATAAGA TCAGCAAGGTGTCTAGCGAAGCGATTTCAGCGCAAGGTGCCAAGGTTATCGACGGTAAAGGTATGACATTAATGCCGGGA CTGATTGAAGGTCACGGTCACTTGCAAATGAATGGCACCTCTTTGCCGGATATTGAAAATAATCGCAACTGGGAAGAGTT GGCTGCACGCTCTGCAGCCAGAGCAAACTCGGCGTTGCTGTCAGGCTTTACCACATGGCGTGACGCGGGGGGGATGGGCG CTGGCCTTAAGAAAACCATCGATAGCGGCGAACTTATCGGTCCGCGTATTTATCCGTCCGGTGCATTTATTGGCCCGACA GGCTCTCATGCCGACTTTCGTAATTTCAACACCCCTAACGAAACTTTCTATGGACATAACTCCTCAGGCGGTCGACTCGG TATGAGCTGCACCGCAGACAGTATCGGCGACATTAAAGCCTGTGCTCGCCAGAACTATATGCAAGGGGCAACACAGATTA AGTTGATGTCTAGCGGCGGCGTGGCGTCATCGTTTGACCCATGGCAGCTCAATGCTTACTCGCTTGAAGAGTTACAGGCG GCAGTTGAAGTGGCAGATGCCTATGGCTCCTACGCCATGTCACATGCCTACAGTAAGGTATCACTGCTGCGAAACTTAGA AGCCGGGGTGAAAACCTTAGAGCATGCTTTTATGTTTGATAAAGATGTTTATAAGGCAATGAAGAAAAACGACGCCTATA TGACCACCAATATGACGGCGTTTTCACCTTATTTAGGCGAAATAGAAGCCATTAATTCAAACCCTGCTTCTGCGCGTAAA GCCAAAACTGCTCAGGCAGCATTTGGCAATTATATTGATAATGTGAACAAGTATAAGCCTAAGCTAGGCTTCCATGTGGA CTGTGTTGGTGGCGTTGCGGCGTGTGAGCAGCAAGCCGACCATTCTATCTACCTGAGCGGGAAGTTCTTTGGTAACCATT ACACCTTGATTTCGATGACATCGGTTAACGGTGAAATCGTTAAGCTGGCGGGTGAAGTACTGGATCCTTACTTTGAGGGC AAACTTGGAGTTGTCGAAGAGGGCGCTTATGCGGATCTGTTATTGGTTGATGGTAACCCATTAGAAGACTTGAGCGTGAT TGGCGCCAATGAAAAGTGGTTCGATGCACCAAAGCGTGATGGCATCGAGACCATGAAGATCATCATGAAAGACGGCGTGA TCTATAAAAATACCCTGTAA
Upstream 100 bases:
>100_bases AATAGTGTGTTTGTTGTCGCTGATTTTGTAACGCTTTTTTAAGTATGGAATGTTACGCGAGGTGAAAACTCACCAAGCAT GGATAACTAGAGGTGCACGA
Downstream 100 bases:
>100_bases TAGCTTTTTATACCCAAACAACTTCAAGATGCAGGATTCAGCATGTCGAGAAGTGACAGAGTTCAAGGCATGAAATTGTA GGACTAGTTATTCTAATTCA
Product: amidohydrolase
Products: NA
Alternate protein names: Prolidase; Xaa-Pro Dipeptidase; Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Family; Secreted Hydrolase; Xaa-Pro Dipeptidase Family; M38 Family Peptidase; Aryldialkylphosphatase Related Protein; Parathion Hydrolase; Pro-Hyp Dipeptidase; Amidohydrolase Imidazolonepropionase; X-Pro Dipeptidase; Aryldialkylphosphatase; Metallo-Dependent Hydrolase; Amidase; Amidohydrolase Domain Protein; Metal-Dependent Hydrolase; Metal-Dependent Amidohydrolase; Exported Adenine Deaminase-Like Amidohydrolase; Dipeptidase; M38 Familypeptidase; Xaa-Arg/Lys Peptidase; Hydrolase; Amidohydrolase Domain-Containing Protein
Number of amino acids: Translated: 459; Mature: 459
Protein sequence:
>459_residues MKYRTLKMSVVAVSCSLAFSVSAESILFTNVNVFDGKKDELLENYQVLVVDNKISKVSSEAISAQGAKVIDGKGMTLMPG LIEGHGHLQMNGTSLPDIENNRNWEELAARSAARANSALLSGFTTWRDAGGMGAGLKKTIDSGELIGPRIYPSGAFIGPT GSHADFRNFNTPNETFYGHNSSGGRLGMSCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQA AVEVADAYGSYAMSHAYSKVSLLRNLEAGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTAFSPYLGEIEAINSNPASARK AKTAQAAFGNYIDNVNKYKPKLGFHVDCVGGVAACEQQADHSIYLSGKFFGNHYTLISMTSVNGEIVKLAGEVLDPYFEG KLGVVEEGAYADLLLVDGNPLEDLSVIGANEKWFDAPKRDGIETMKIIMKDGVIYKNTL
Sequences:
>Translated_459_residues MKYRTLKMSVVAVSCSLAFSVSAESILFTNVNVFDGKKDELLENYQVLVVDNKISKVSSEAISAQGAKVIDGKGMTLMPG LIEGHGHLQMNGTSLPDIENNRNWEELAARSAARANSALLSGFTTWRDAGGMGAGLKKTIDSGELIGPRIYPSGAFIGPT GSHADFRNFNTPNETFYGHNSSGGRLGMSCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQA AVEVADAYGSYAMSHAYSKVSLLRNLEAGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTAFSPYLGEIEAINSNPASARK AKTAQAAFGNYIDNVNKYKPKLGFHVDCVGGVAACEQQADHSIYLSGKFFGNHYTLISMTSVNGEIVKLAGEVLDPYFEG KLGVVEEGAYADLLLVDGNPLEDLSVIGANEKWFDAPKRDGIETMKIIMKDGVIYKNTL >Mature_459_residues MKYRTLKMSVVAVSCSLAFSVSAESILFTNVNVFDGKKDELLENYQVLVVDNKISKVSSEAISAQGAKVIDGKGMTLMPG LIEGHGHLQMNGTSLPDIENNRNWEELAARSAARANSALLSGFTTWRDAGGMGAGLKKTIDSGELIGPRIYPSGAFIGPT GSHADFRNFNTPNETFYGHNSSGGRLGMSCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQA AVEVADAYGSYAMSHAYSKVSLLRNLEAGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTAFSPYLGEIEAINSNPASARK AKTAQAAFGNYIDNVNKYKPKLGFHVDCVGGVAACEQQADHSIYLSGKFFGNHYTLISMTSVNGEIVKLAGEVLDPYFEG KLGVVEEGAYADLLLVDGNPLEDLSVIGANEKWFDAPKRDGIETMKIIMKDGVIYKNTL
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=348, Percent_Identity=29.5977011494253, Blast_Score=139, Evalue=1e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49574; Mature: 49574
Theoretical pI: Translated: 5.87; Mature: 5.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYRTLKMSVVAVSCSLAFSVSAESILFTNVNVFDGKKDELLENYQVLVVDNKISKVSSE CCEEEEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCHHHHHCCCEEEEEECHHHHHHHH AISAQGAKVIDGKGMTLMPGLIEGHGHLQMNGTSLPDIENNRNWEELAARSAARANSALL HHHCCCCEEECCCCCEECCHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SGFTTWRDAGGMGAGLKKTIDSGELIGPRIYPSGAFIGPTGSHADFRNFNTPNETFYGHN HHHHHHHCCCCCCCCHHHHCCCCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCEECCC SSGGRLGMSCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQA CCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHH AVEVADAYGSYAMSHAYSKVSLLRNLEAGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEE FSPYLGEIEAINSNPASARKAKTAQAAFGNYIDNVNKYKPKLGFHVDCVGGVAACEQQAD CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCC HSIYLSGKFFGNHYTLISMTSVNGEIVKLAGEVLDPYFEGKLGVVEEGAYADLLLVDGNP CEEEEEEEEECCEEEEEEEECCCCHHEEHHHHHHCHHHCCCCCEEECCCEEEEEEECCCC LEDLSVIGANEKWFDAPKRDGIETMKIIMKDGVIYKNTL CCCCEEECCCCHHCCCCCCCCHHHHHHHHHCCEEEECCC >Mature Secondary Structure MKYRTLKMSVVAVSCSLAFSVSAESILFTNVNVFDGKKDELLENYQVLVVDNKISKVSSE CCEEEEEEEEEEEEEEEEEECCCCEEEEEEEEECCCCHHHHHCCCEEEEEECHHHHHHHH AISAQGAKVIDGKGMTLMPGLIEGHGHLQMNGTSLPDIENNRNWEELAARSAARANSALL HHHCCCCEEECCCCCEECCHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH SGFTTWRDAGGMGAGLKKTIDSGELIGPRIYPSGAFIGPTGSHADFRNFNTPNETFYGHN HHHHHHHCCCCCCCCHHHHCCCCCCCCCEECCCCCEECCCCCCCCCCCCCCCCCCEECCC SSGGRLGMSCTADSIGDIKACARQNYMQGATQIKLMSSGGVASSFDPWQLNAYSLEELQA CCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHH AVEVADAYGSYAMSHAYSKVSLLRNLEAGVKTLEHAFMFDKDVYKAMKKNDAYMTTNMTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCEE FSPYLGEIEAINSNPASARKAKTAQAAFGNYIDNVNKYKPKLGFHVDCVGGVAACEQQAD CCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHCCC HSIYLSGKFFGNHYTLISMTSVNGEIVKLAGEVLDPYFEGKLGVVEEGAYADLLLVDGNP CEEEEEEEEECCEEEEEEEECCCCHHEEHHHHHHCHHHCCCCCEEECCCEEEEEEECCCC LEDLSVIGANEKWFDAPKRDGIETMKIIMKDGVIYKNTL CCCCEEECCCCHHCCCCCCCCHHHHHHHHHCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA