| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962774
Identifier: 157962774
GI number: 157962774
Start: 3618060
End: 3618911
Strand: Reverse
Name: 157962774
Synonym: Spea_2956
Alternate gene names: NA
Gene position: 3618911-3618060 (Counterclockwise)
Preceding gene: 157962776
Following gene: 157962773
Centisome position: 69.94
GC content: 44.25
Gene sequence:
>852_bases ATGAAAACCCTACACATGACTCGACAGCTACAACGTTGTAAGAATAAGCGTTTTGAGTTGTATGCTATCACCCGAATTAT TCATAAGGTCGATGATCTTGATATTAAGTTTATCACCCAGCAATACGTTGCTAGACCAGATGGTTTTGCACTGACCGATC TGTATCTTCCCCAGCTTAAGTTGCACATAGAGATCGATGAAGGCTTTCATAAGCAGCAGGTCGATGCGGACAAGGTTCGA GAGCTCGATATTATTACCGCGACCGATCATCAGGTTAAACGTATCGATGCCTCAGTAGCAATTGAGCAGATTAACTTACA GGTTGACCAAATCGTGGCCGAGATCCTGCAAAGCGTTGAAGTGCAGAAAGCTGCGGGAAATTTTCAAGCTTGGGATCCTG AGACTGAGCACAGCGTAAGCTACCTACAGAGCCGCGGGGTTATTCGTGCCAGTGAAAACGTGGCGCTGCGCACTTCTGCT GAGGTCTGTAATCTGCTCGGGCATAACTATAAAGGCTGGCAGCGATCTTCAGCCAGCGTACCTCACTATCCCAATATAAG GCTGTGGTTCCCAAAACTGTACCCCAACGAGCAGTGGTTTAATCATATCAGCTATGATGGCTGTGAAATTCATGAATACT GCATTGAATCAGAAACTAAGAAACGTCAGTTTATCGATAAAAATTTGTCTGAAAATATTCAGCAGATGGTTTTTGCTCGT GTAAAAGATGAGCTGGGGCAGACCATGTATCGCTTTAAAGGCTTATTTATATTAGATAGAGATAAAACCTGTCATGAGTC CGGGGTCTATTGGAAGCGTGTTGCAACCGAGTTTGAACTGGGATTAACATAG
Upstream 100 bases:
>100_bases TCGAATAGAGTGAATATTATTTTGTGGGGATTTAACTTAAATTGAAAAATCTATAAAATTATCGCCCCAATTTTTATGTA TTGACTCTTGTTCGAACGGT
Downstream 100 bases:
>100_bases CAGTGAATAAGCACTGAAAAAGGAGAGTTCAACTATAATAATGATAGTGAATTCTCTTATTTCGGAGGACGCACAAAAGT ACACTGTTAGGTTAATAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MKTLHMTRQLQRCKNKRFELYAITRIIHKVDDLDIKFITQQYVARPDGFALTDLYLPQLKLHIEIDEGFHKQQVDADKVR ELDIITATDHQVKRIDASVAIEQINLQVDQIVAEILQSVEVQKAAGNFQAWDPETEHSVSYLQSRGVIRASENVALRTSA EVCNLLGHNYKGWQRSSASVPHYPNIRLWFPKLYPNEQWFNHISYDGCEIHEYCIESETKKRQFIDKNLSENIQQMVFAR VKDELGQTMYRFKGLFILDRDKTCHESGVYWKRVATEFELGLT
Sequences:
>Translated_283_residues MKTLHMTRQLQRCKNKRFELYAITRIIHKVDDLDIKFITQQYVARPDGFALTDLYLPQLKLHIEIDEGFHKQQVDADKVR ELDIITATDHQVKRIDASVAIEQINLQVDQIVAEILQSVEVQKAAGNFQAWDPETEHSVSYLQSRGVIRASENVALRTSA EVCNLLGHNYKGWQRSSASVPHYPNIRLWFPKLYPNEQWFNHISYDGCEIHEYCIESETKKRQFIDKNLSENIQQMVFAR VKDELGQTMYRFKGLFILDRDKTCHESGVYWKRVATEFELGLT >Mature_283_residues MKTLHMTRQLQRCKNKRFELYAITRIIHKVDDLDIKFITQQYVARPDGFALTDLYLPQLKLHIEIDEGFHKQQVDADKVR ELDIITATDHQVKRIDASVAIEQINLQVDQIVAEILQSVEVQKAAGNFQAWDPETEHSVSYLQSRGVIRASENVALRTSA EVCNLLGHNYKGWQRSSASVPHYPNIRLWFPKLYPNEQWFNHISYDGCEIHEYCIESETKKRQFIDKNLSENIQQMVFAR VKDELGQTMYRFKGLFILDRDKTCHESGVYWKRVATEFELGLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33118; Mature: 33118
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLHMTRQLQRCKNKRFELYAITRIIHKVDDLDIKFITQQYVARPDGFALTDLYLPQLK CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCEEE LHIEIDEGFHKQQVDADKVRELDIITATDHQVKRIDASVAIEQINLQVDQIVAEILQSVE EEEEECCCCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQKAAGNFQAWDPETEHSVSYLQSRGVIRASENVALRTSAEVCNLLGHNYKGWQRSSASV HHHHCCCCCCCCCCCHHHHHHHHHCCCEEECCCEEEECHHHHHHHHCCCCCCCCCCCCCC PHYPNIRLWFPKLYPNEQWFNHISYDGCEIHEYCIESETKKRQFIDKNLSENIQQMVFAR CCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VKDELGQTMYRFKGLFILDRDKTCHESGVYWKRVATEFELGLT HHHHHHHHHHHHCCEEEEECCCCCHHCCCHHHHHHHHHHCCCC >Mature Secondary Structure MKTLHMTRQLQRCKNKRFELYAITRIIHKVDDLDIKFITQQYVARPDGFALTDLYLPQLK CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEEEECCEEE LHIEIDEGFHKQQVDADKVRELDIITATDHQVKRIDASVAIEQINLQVDQIVAEILQSVE EEEEECCCCCCCCCCHHHHHEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VQKAAGNFQAWDPETEHSVSYLQSRGVIRASENVALRTSAEVCNLLGHNYKGWQRSSASV HHHHCCCCCCCCCCCHHHHHHHHHCCCEEECCCEEEECHHHHHHHHCCCCCCCCCCCCCC PHYPNIRLWFPKLYPNEQWFNHISYDGCEIHEYCIESETKKRQFIDKNLSENIQQMVFAR CCCCCEEEEECCCCCCHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH VKDELGQTMYRFKGLFILDRDKTCHESGVYWKRVATEFELGLT HHHHHHHHHHHHCCEEEEECCCCCHHCCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA