| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962757
Identifier: 157962757
GI number: 157962757
Start: 3600847
End: 3601587
Strand: Reverse
Name: 157962757
Synonym: Spea_2939
Alternate gene names: NA
Gene position: 3601587-3600847 (Counterclockwise)
Preceding gene: 157962758
Following gene: 157962756
Centisome position: 69.6
GC content: 45.48
Gene sequence:
>741_bases ATGGACTCATGCATGACTATTTCGTTACTCGACCTTTTTGCGCCATTTTGTTTTATTACTTGCTGGGTCGGCTATGCCTA TTTTGCTAAGCGTAAAGCCAAAGACACTAACTGCATCGCTCGCTGTTTACATAAGCACCGCATCAACTGGATGTATGAAT TATTAGGCCGTGAGGTACGAGTCGGTGATGCCGCCTTGCTTGCTAATCTTGAGCGCAATATTGCCTTTTTCGCATCGACT ACCATGTTTGTGCTTGCGGGTGTGTTAACCCTGTTTGCTCAGGCCGAACGTCTCGAAACTGTGATAGCAACCATTCCTTA TGCTGCCAACCCGAATCACGCGTTAGTTCAAGTTAAGCTAGGCATGCTGACATTTATTTTTGTGATGGCATTTTTCCAGT TCACTTGGTCGATGCGCCAATATGGCTTCTTAAATGTGATGGTGGGAGCTGCACCTGTCGATAAAACTGGCTCTAATGAC AACCTACTTCGCTATGCTGAGCAGATGGCGGTGGTGCAAGATCAGGCGGCTCACTCTTATAATTACGGTTTGCGTTGTTA CTACTTTGCCATGGCGGCACTGTGTTGGTTTTACCATCCATTTGTCTTGATTATTGCCAGTGTTTTTGTGGTGTACACAC TCTATCGACGCGAGTTTAAATCTAAGGCCGTGGTGGCGATTACTAGAGGCCAGGAGCTGCTAAAGATTGAAAGGGCCAAT AAGTTTAAGTTGGATGATTAA
Upstream 100 bases:
>100_bases ACTTAATAACACTAGGCTTATTTTTGTATTTGATTAACCTATAAATCTACAGACTGGAAATAGCCAGTTGTTAGAACTGA TTTTGACTCGTTTATCCTCG
Downstream 100 bases:
>100_bases TCTCTAACTTTTGAATTTTCCGCGACGATAGCCTTTGAATCGTATAATATTGCGCGCTGTTTTTCATCGGCATTTAGGAT TAAGATTTTGCACACCATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MDSCMTISLLDLFAPFCFITCWVGYAYFAKRKAKDTNCIARCLHKHRINWMYELLGREVRVGDAALLANLERNIAFFAST TMFVLAGVLTLFAQAERLETVIATIPYAANPNHALVQVKLGMLTFIFVMAFFQFTWSMRQYGFLNVMVGAAPVDKTGSND NLLRYAEQMAVVQDQAAHSYNYGLRCYYFAMAALCWFYHPFVLIIASVFVVYTLYRREFKSKAVVAITRGQELLKIERAN KFKLDD
Sequences:
>Translated_246_residues MDSCMTISLLDLFAPFCFITCWVGYAYFAKRKAKDTNCIARCLHKHRINWMYELLGREVRVGDAALLANLERNIAFFAST TMFVLAGVLTLFAQAERLETVIATIPYAANPNHALVQVKLGMLTFIFVMAFFQFTWSMRQYGFLNVMVGAAPVDKTGSND NLLRYAEQMAVVQDQAAHSYNYGLRCYYFAMAALCWFYHPFVLIIASVFVVYTLYRREFKSKAVVAITRGQELLKIERAN KFKLDD >Mature_246_residues MDSCMTISLLDLFAPFCFITCWVGYAYFAKRKAKDTNCIARCLHKHRINWMYELLGREVRVGDAALLANLERNIAFFAST TMFVLAGVLTLFAQAERLETVIATIPYAANPNHALVQVKLGMLTFIFVMAFFQFTWSMRQYGFLNVMVGAAPVDKTGSND NLLRYAEQMAVVQDQAAHSYNYGLRCYYFAMAALCWFYHPFVLIIASVFVVYTLYRREFKSKAVVAITRGQELLKIERAN KFKLDD
Specific function: Unknown
COG id: COG3821
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28175; Mature: 28175
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDSCMTISLLDLFAPFCFITCWVGYAYFAKRKAKDTNCIARCLHKHRINWMYELLGREVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC VGDAALLANLERNIAFFASTTMFVLAGVLTLFAQAERLETVIATIPYAANPNHALVQVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHH GMLTFIFVMAFFQFTWSMRQYGFLNVMVGAAPVDKTGSNDNLLRYAEQMAVVQDQAAHSY HHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH NYGLRCYYFAMAALCWFYHPFVLIIASVFVVYTLYRREFKSKAVVAITRGQELLKIERAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCC KFKLDD CCCCCC >Mature Secondary Structure MDSCMTISLLDLFAPFCFITCWVGYAYFAKRKAKDTNCIARCLHKHRINWMYELLGREVR CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC VGDAALLANLERNIAFFASTTMFVLAGVLTLFAQAERLETVIATIPYAANPNHALVQVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHH GMLTFIFVMAFFQFTWSMRQYGFLNVMVGAAPVDKTGSNDNLLRYAEQMAVVQDQAAHSY HHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH NYGLRCYYFAMAALCWFYHPFVLIIASVFVVYTLYRREFKSKAVVAITRGQELLKIERAN CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHCCC KFKLDD CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA